Query= PF10_0217 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) pre-mRNA splicing factor, putative (538 letters)
>FBgn0004587 type=protein;
           loc=3R:join(9491190..9491248,9491312..9491623,
           9491806..9491970,9492141..9492255); ID=FBpp0099648;
           name=B52-PH; parent=FBgn0004587,FBtr0100261;
           dbxref=FlyBase_Annotation_IDs:CG10851-PH,
           FlyBase:FBpp0099648,GB_protein:AAX52949.1,
           GB_protein:AAX52949;
           MD5=61b3b5c63517ead718fe7292241779c9; release=r5.1;
           species=Dmel; length=216;
          Length = 216

 Score = 40.0 bits (92), Expect = 8e-08
 Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 130 MRQCGDVGYANIE---RGKGIVEFVSYDDMLYAIEKFDGAEFKVYDDVTNIKVRRDKRG 185
           MRQ G+V YA+     R +G+VEF S  DM  AIEK D  E     +   I +  D+RG
Sbjct: 1   MRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTEL----NGRRIHLVEDRRG 55

 Score = 21.9 bits (45), Expect = 0.024
 Identities = 9/39 (23%), Positives = 24/39 (61%)

Query: 402 RELKSQDKSNDRLSESKKSYKSQSASVRYNSTEEKKSDD 440
           R+ +S+D+S    ++S+   +S+SAS +  +    ++++
Sbjct: 174 RDSRSRDRSASAENKSRSRSRSRSASPKNGNASPDRNNE 212

 Score = 21.2 bits (43), Expect = 0.041
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 299 KNKNESSSDVLSKHSSAYRDSDSEKNKSYRKRLSSDNRS 337
           K+K++S S   S+     RDS S      ++   S +RS
Sbjct: 131 KSKSKSHSRTRSRSPKRERDSRSRSRSVSKRESRSRSRS 169

 Score = 20.0 bits (40), Expect = 0.090
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 36 GRIKYIDIKPXXXXXXXYAFVHYYDLKDADYAIERRDGYKFDGFRLRVEHSGENRSFGK 94
          G + Y D            F    D+K    AIE+ D  + +G R+   H  E+R  G+
Sbjct: 5  GEVTYADAHKQRRNEGVVEFASLSDMKT---AIEKLDDTELNGRRI---HLVEDRRGGR 57

 Score = 16.9 bits (32), Expect = 0.77
 Identities = 8/22 (36%), Positives = 9/22 (40%)

Query: 317 RDSDSEKNKSYRKRLSSDNRSH 338
           R S S      R+R  S   SH
Sbjct: 70  RSSSSRSRSRSRRRSRSRRSSH 91
Lambda     K      H
   0.310    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 223
Number of extensions: 9
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 538
Length of database: 216
Length adjustment: 28
Effective length of query: 510
Effective length of database: 188
Effective search space:    95880
Effective search space used:    95880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.2 bits)
S2: 23 (13.5 bits)