Query= PF10_0225 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) orotidine-monophosphate-decarboxylase, putative (323 letters)
>YGR090W UTP22 SGDID:S000003322, Chr VII from 662362-666075,
            Uncharacterized ORF, "Possible U3 snoRNP protein involved
            in maturation of pre-18S rRNA, based on computational
            analysis of large-scale protein-protein interaction data"
          Length = 1237

 Score = 28.9 bits (63), Expect = 7e-04
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 3/108 (2%)

Query: 159  SDSCTVNIYMGTNMLKDICYDEEKNKYYSAFVLVKTTNPDSAIFQKNLSLDNKQAYVIMA 218
            S+  T+  Y G  M      + + N  +  F +    +P   ++   + L        +A
Sbjct: 1009 SERLTLAQYKGIQMNFTNLRNSDPNGTHLQFFVASKNDPSGILYSSGIPLPIATRLTALA 1068

Query: 219  QEALNMSSYLNLEQNNEFIGFVVGANSYDEMNYIRTYF---PNCYILS 263
            + A+N+     L Q    + F  G   YD +  +RT      +C ILS
Sbjct: 1069 KVAVNLLQTHGLNQQTINLLFTPGLKDYDFVVDLRTPIGLKSSCGILS 1116

 Score = 20.0 bits (40), Expect = 0.32
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 122 VFDYLYELNIPTILDMKINDI-----GNTVKNYRKFIFEYLKSDSCTVNIYMGTNMLKDI 176
           +FD   ++NI T + +    I     G T++     + +   +   T NI    N+  D+
Sbjct: 467 LFDKSTKVNILTKMTVSSYQILKEYAGETLRMLNNVVQDQFSNIFLT-NISRFDNLKYDL 525

Query: 177 CYD 179
           CYD
Sbjct: 526 CYD 528

 Score = 18.9 bits (37), Expect = 0.72
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 199 SAIFQKNLSLDNKQAYVIMAQEALNMSSYLNLE 231
           S IF  N+S  +   Y +     L +  Y NLE
Sbjct: 508 SNIFLTNISRFDNLKYDLCYDVQLPLGKYNNLE 540

 Score = 18.5 bits (36), Expect = 0.94
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query: 222 LNMSSYLNLEQN 233
           LN+SS+ NL+++
Sbjct: 722 LNLSSFFNLKKS 733

 Score = 16.5 bits (31), Expect = 3.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 227  YLNLEQNNEFI 237
            YLNL+  N  I
Sbjct: 1152 YLNLKYKNSLI 1162

 Score = 15.8 bits (29), Expect = 6.1
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 260 YILSPGIGAQNGDLHKTLTNGYHKSYEK 287
           + L  GI   NG    TL     + +EK
Sbjct: 189 FALKAGIYQPNGSSIDTLLTMPKELFEK 216
Lambda     K      H
   0.319    0.137    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 874
Number of extensions: 53
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 6
Length of query: 323
Length of database: 1237
Length adjustment: 37
Effective length of query: 286
Effective length of database: 1200
Effective search space:   343200
Effective search space used:   343200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)