Query= PF10_0264 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) 40S ribosomal
protein, putative
(263 letters)
>FBgn0003517 type=protein;
loc=X:complement(1375920..1376513,1376706..1377053);
ID=FBpp0070279; name=sta-PD;
parent=FBgn0003517,FBtr0070291;
dbxref=GB_protein:AAN09050.1,GB_protein:AAN09050.2,
FlyBase:FBpp0070279,FlyBase_Annotation_IDs:CG14792-PD,
GB_protein:AAN09050;
MD5=988c2c24948820589c034c8fb739e34f; release=r5.1;
species=Dmel; length=313;
Length = 313
Score = 265 bits (677), Expect = 9e-76
Identities = 139/263 (52%), Positives = 176/263 (66%), Gaps = 14/263 (5%)
Query: 8 SPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHIINLAKTYEKLQLAARIIVAI 67
S KE+ I KML+ H+G++N+ +M++YVY R DGV+I+NL KT+EKLQLAAR IVAI
Sbjct: 52 SLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAARAIVAI 111
Query: 68 SNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPR 127
NP+D+ V+S+RP G RAVLKFA+YT IAGR+TPG TNQI F EPRLL+VTDP
Sbjct: 112 DNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTPGAFTNQIQPAFREPRLLVVTDPN 171
Query: 128 TDAQSVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGV 187
TD Q + E++Y NIPVIA ++DSPL ++DIAIPCNNK SI LM+WLLA+EVL L+G
Sbjct: 172 TDHQPIMEASYVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGT 231
Query: 188 IPRSEPWNVMVDMFLWRDPEQFELKNLANEENTPTAPHLIENQYAAEAPYDEWTKKEEWN 247
I RS W V+VD+F +RDPE+ E + A +E P P IE A + P +E T W
Sbjct: 232 ISRSVEWPVVVDLFFYRDPEEAEKEEAAAKELLP--PPKIEE--AVDHPVEETT---NWA 284
Query: 248 DNTN-------EDWKNPIAAEEW 263
D EDW W
Sbjct: 285 DEVAAETVGGVEDWNEDTVKTSW 307
Lambda K H
0.315 0.131 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 261
Number of extensions: 9
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 313
Length adjustment: 26
Effective length of query: 237
Effective length of database: 287
Effective search space: 68019
Effective search space used: 68019
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (12.9 bits)
S2: 22 (13.1 bits)