Query= PF10_0272 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L3, putative
(386 letters)
>FBgn0020910 type=protein;
loc=3R:join(7047652..7047654,7047897..7048089,
7048283..7048451,7049117..7049252,7049580..7049969,
7050213..7050572); ID=FBpp0081822; name=RpL3-PA;
parent=FBgn0020910,FBtr0082346;
dbxref=FlyBase:FBpp0081822,
FlyBase_Annotation_IDs:CG4863-PA,GB_protein:AAF54610.2,
GB_protein:AAF54610;
MD5=96aa8a3d3896e3e1a66971d6b83371dd; release=r5.1;
species=Dmel; length=416;
Length = 416
Score = 491 bits (1265), Expect = e-143
Identities = 237/395 (60%), Positives = 297/395 (75%), Gaps = 12/395 (3%)
Query: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
MSHRKF PRHGS+ F P+KR R RGK+++FPKDD KP H T F+GYKAGMTHIVRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
D+PGSK++KKE+VEA T++E PM+VVG VGY ETP GLR L VWA H+S+E RRR+YK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWYKSEKKAFTKSLN--VPEATKNCL---LKRIEKYCTVLRAICHTQPSKTPLRMKKAHI 175
NWYKS+KKAFTK+ + K + +++ +YC V+R I H+Q R KKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 176 MEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKRL 235
ME+Q+NGGS+++K+++ +E LEK + VS VF +EMID + VTKG G KGV SR+ K+L
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKL 240
Query: 236 PRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGL-------KTDK 288
PRKTH+GLRKVACIGAWHP+RV + R GQKGY HRTE NKKIYRIG K K
Sbjct: 241 PRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIK 300
Query: 289 NSASTDADITEKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPITLRKNIVPQVSRDAL 348
N+AST+ D+T+K ITPMGGFPHYG VN DF+++KGC G+KKR ITLRK+++ R AL
Sbjct: 301 NNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSAL 360
Query: 349 AQVSLKFIDTSSKIGHGRFQTSEEKVKYYGPLKKD 383
Q+ LKFIDTSSK+GHGRFQT +K+ + GPLKKD
Sbjct: 361 EQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKD 395
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 565
Number of extensions: 16
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 416
Length adjustment: 31
Effective length of query: 355
Effective length of database: 385
Effective search space: 136675
Effective search space used: 136675
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)