Query= PF10_0277 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein, conserved
(315 letters)
>YKL172W EBP2 SGDID:S000001655, Chr XI from 125764-127047, Verified
ORF, "Essential protein required for the maturation of
25S rRNA and 60S ribosomal subunit assembly, localizes
to the nucleolus; constituent of 66S pre-ribosomal
particles"
Length = 427
Score = 51.2 bits (121), Expect = 4e-11
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 97 KKNNWIERLDITSTEYYYLKKTELFGISESREKQLQNITHMNVIQALQKLQELNIKFNRP 156
KK+++ E +TS +++ +E RE + V+ A +L+ L + F RP
Sbjct: 213 KKHSFQEHQSVTSETNTDEHIKDIYDDTE-RELAFYKQSLDAVLVARDELKRLKVPFKRP 271
Query: 157 YDFLADMLKSDIHMEKIRQKILKEHEQAEVREXXXXXXXXXXXXXXCGSQKIKSHKEALE 216
D+ A+M+KSD HM+KI+ K+++E + RE Q K LE
Sbjct: 272 LDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQLKKFGKQV--QNATLQKRQLE 329
Query: 217 KKQNLLKI 224
K++ L KI
Sbjct: 330 KRETLEKI 337
Score = 18.5 bits (36), Expect = 0.31
Identities = 20/92 (21%), Positives = 36/92 (39%)
Query: 97 KKNNWIERLDITSTEYYYLKKTELFGISESREKQLQNITHMNVIQALQKLQELNIKFNRP 156
KK+ +++ + T LKK E +K++ T QAL K ++ +K
Sbjct: 30 KKSQELKKEEPTIVTASNLKKLEKKEKKADVKKEVAADTEEYQSQALSKKEKRKLKKELK 89
Query: 157 YDFLADMLKSDIHMEKIRQKILKEHEQAEVRE 188
D ++ HM + + E+ E E
Sbjct: 90 KMQEQDATEAQKHMSGDEDESGDDREEEEEEE 121
Score = 16.9 bits (32), Expect = 0.90
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 206 QKIKSHKEALEKKQNL 221
+++ SH++ +EK + L
Sbjct: 8 KELLSHQKEIEKAEKL 23
Score = 15.4 bits (28), Expect = 2.6
Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 134 ITHMNVIQALQKLQ-ELNIKFNRPYDFLADMLKSDIHMEKIRQKILKEHEQAEV 186
++H I+ +KL+ +L K ++ + + +++K+ +K K + EV
Sbjct: 11 LSHQKEIEKAEKLENDLKKKKSQELKKEEPTIVTASNLKKLEKKEKKADVKKEV 64
Lambda K H
0.315 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 237
Number of extensions: 15
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 4
Length of query: 315
Length of database: 427
Length adjustment: 30
Effective length of query: 285
Effective length of database: 397
Effective search space: 113145
Effective search space used: 113145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.4 bits)
S2: 23 (13.5 bits)