Query= PF10_0300 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein, conserved (257 letters)
>YDL112W TRM3 SGDID:S000002270, Chr IV from 258915-263225, Verified
            ORF, "2'-O-ribose methyltransferase, catalyzes the ribose
            methylation of the guanosine nucleotide at position 18 of
            tRNAs"
          Length = 1436

 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 5/160 (3%)

Query: 42   KLKKDSYEKIKTYVVIYNIGKKKNVGCIVRSCVAFNVHKIFIVGKRKKEINFFGNMG-TY 100
            K   D   + +  VV   + K  N+G I R C    V  + +   + K    F N+  T 
Sbjct: 1275 KKSNDVVTRSELIVVSSLVDKPPNLGGICRLCDVLGVGLLTVQDIKVKNHPQFKNVAVTA 1334

Query: 101  D-YITIEY--FDNIYELKEYLTKHDILLYACEISVNALSITTNPYEHKDTAFLFGNEGTG 157
            D ++ +E    D I    +   K    L   E +  ++ +  N    K +  L G E  G
Sbjct: 1335 DRWMPMEEVALDEIASFMKEKKKEGYTLIGLEQTDKSVKLDNNFQFPKKSLILLGTEAFG 1394

Query: 158  IHDNVLKICDKIIYIPQYGKGTASLNVSVSCAIILQNFAV 197
            I   +L   D  + I Q+G    S+N+  + A+I+ ++ V
Sbjct: 1395 IPGTLLSELDLCLEIQQFGV-IRSMNIQTATAVIVHSYTV 1433

 Score = 15.8 bits (29), Expect = 5.5
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 107 YFDNIYELKEYLTKHDILLYACEISVNALSITTNPYEHKDTAFLFGNEGTGIHDNVLKIC 166
           +FD+  E +    KH+       + ++ LS+      + +  +LF     GI       C
Sbjct: 135 FFDSFAEEQNANIKHE------NLHLDILSL----LHYLEVVYLFDECKNGISSK----C 180

Query: 167 DKIIYIPQYGKGTASLNVSVSCAIILQ 193
              I +P    G  S  ++ SC+ +++
Sbjct: 181 LDFIIVPLL--GCNSEEIADSCSKLMR 205

 Score = 15.0 bits (27), Expect = 9.3
 Identities = 5/18 (27%), Positives = 13/18 (72%)

Query: 231 LKQIHFKRSLRSQKKKEN 248
           +KQ++ + S ++ K+K +
Sbjct: 229 IKQLYAEGSQQAWKQKNS 246
Lambda     K      H
   0.319    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 861
Number of extensions: 40
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 257
Length of database: 1436
Length adjustment: 37
Effective length of query: 220
Effective length of database: 1399
Effective search space:   307780
Effective search space used:   307780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.3 bits)
S2: 27 (15.0 bits)