Query= PF10_0317 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(263 letters)
>YDR411C DFM1 SGDID:S000002819, Chr IV from 1294385-1293360, reverse
complement, Uncharacterized ORF, "Protein of unknown
function, localizes to the ER, contains four
transmembrane domains; member of the Der1p-like family"
Length = 341
Score = 55.5 bits (132), Expect = 2e-12
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 11/195 (5%)
Query: 2 DISGPEVWYNNLPNVTKYXXXXXXXXXXXXXCNLLNVVYILLDWNLIYYKYHIWRIFLNF 61
D+ GP+ ++ N+P +T+ NL+N Y + WNL + K IWR+ +
Sbjct: 19 DVMGPKEFWLNIPPITRTLFTLAIVMTIVGRLNLINPWYFIYVWNLTFKKVQIWRLLTSC 78
Query: 62 LYVGKFSLSWVFFMSLFAQFSSSLEKN----GIFTSPG-----SYLYFITIQCTFLSLIS 112
+ + ++ + + SS LE+ G+ G Y Y++ ++ +
Sbjct: 79 VMLSSRAMPALMELYSIYDRSSQLERGHFGPGLSNRRGPMVTVDYAYYLCFCILAITTAT 138
Query: 113 ILFYWPRGYPFLGNSLLFAIIYYWSRREAWSHVSIY-FFTVKGYQLPFALIFLHLIMGQS 171
+ Y L + + I Y WS A + Y V G P +F+ + +
Sbjct: 139 TIIYGSYYPVVLTSGFISCITYTWSIDNANVQIMFYGLIPVWGKYFPLIQLFISFVFNEG 198
Query: 172 LWV-DIMGLLSGHVY 185
+V ++G +G++Y
Sbjct: 199 DFVISLIGFTTGYLY 213
Score = 22.3 bits (46), Expect = 0.014
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 65 GKFSLSWVFFMSLFAQFSSSLEKNGIFTS 93
GKFS W +F SL+A+ + + + F +
Sbjct: 242 GKFSTPW-WFTSLYARITGAHNETATFNN 269
Score = 16.5 bits (31), Expect = 0.77
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 253 FIGRGVRLGDS 263
F GRG R+G +
Sbjct: 324 FQGRGQRVGQT 334
Score = 14.2 bits (25), Expect = 3.8
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 222 NGIRNN 227
NG RNN
Sbjct: 13 NGGRNN 18
Lambda K H
0.331 0.148 0.492
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 263
Number of extensions: 18
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 263
Length of database: 341
Length adjustment: 27
Effective length of query: 236
Effective length of database: 314
Effective search space: 74104
Effective search space used: 74104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.3 bits)
S2: 22 (13.1 bits)