>YGR159C NSR1 SGDID:S000003391, Chr VII from 807661-806417, reverse
           complement, Verified ORF, "Nucleolar protein that binds
           nuclear localization sequences, required for pre-rRNA
           processing and ribosome biogenesis"
          Length = 414

 Score = 36.2 bits (82), Expect = 3e-06
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 219 EHTEQINEETTKQNVEQSMEETAEENIEGNKEEYIEENND-EYMDESMETYEDNESEYNA 277
           E  E+  EET K+  ++S    +  +   + E   EE+ND +   E  E  ED ES    
Sbjct: 99  EEEEEEKEETKKEESKESSSSDSSSSSSSDSESEKEESNDKKRKSEDAEEEEDEESSNKK 158

Query: 278 EQNEVYTEQQT 288
           ++NE   E  T
Sbjct: 159 QKNEETEEPAT 169

 Score = 28.1 bits (61), Expect = 7e-04
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 219 EHTEQINEETTKQNVEQSMEETAEENIEGNKEEYIEENNDE--YMDESMETYEDNESE 274
           E   +  +E +K +   S + +++E  E  KEE  +E + E    D S  +  D+ESE
Sbjct: 75  ESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSSDSSSSSSSDSESE 132

 Score = 25.8 bits (55), Expect = 0.003
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 225 NEETTKQNVEQSMEETAEENIEGNKEEYIEENNDEYMDESMETYEDNESEYNAEQNEVYT 284
           +E   +   E+S + ++  +   + EE  EE  +   +ES E+   + S  ++  +E   
Sbjct: 74  SESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSSDSSSSSSSDSESEK 133

Query: 285 EQ 286
           E+
Sbjct: 134 EE 135

 Score = 24.6 bits (52), Expect = 0.008
 Identities = 13/71 (18%), Positives = 33/71 (46%)

Query: 221 TEQINEETTKQNVEQSMEETAEENIEGNKEEYIEENNDEYMDESMETYEDNESEYNAEQN 280
           +E  +E ++  +   S   ++  +   ++ E  +E + +    S ++  D E E   E+ 
Sbjct: 49  SESESESSSSSSSSDSESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEET 108

Query: 281 EVYTEQQTSSS 291
           +    +++SSS
Sbjct: 109 KKEESKESSSS 119

 Score = 23.1 bits (48), Expect = 0.022
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 221 TEQINEETTKQNVEQSMEETAEENIEGNKEEYIEENNDEYMDESMETYEDN-----ESEY 275
           ++Q  EE  K     S E ++  +     E   E  ++     S    E +     +SE 
Sbjct: 17  SKQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSSSSSSDSESSSSSSSDSES 76

Query: 276 NAEQNEVYTEQQTSSS 291
            AE  +  ++  +SSS
Sbjct: 77  EAETKKEESKDSSSSS 92

 Score = 22.3 bits (46), Expect = 0.038
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 230 KQNVEQSMEETAEENIEGNKEEYIEENNDEYMDESMETYEDNESEYNAEQNEVYTEQQTS 289
           K+ V+ S ++  EE  +       E ++        E+  ++ESE ++  +   +E  +S
Sbjct: 11  KKEVKAS-KQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSSSSSSDSESSSS 69

Query: 290 SS 291
           SS
Sbjct: 70  SS 71

 Score = 21.2 bits (43), Expect = 0.084
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 219 EHTEQINEETTKQNVEQSMEETAEENIEGNKEEYIEENN---DEYMDESMETYEDNESEY 275
           E     +  ++      S    +E   E  KEE  + ++   D   DE  E  E+ E   
Sbjct: 52  ESESSSSSSSSDSESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEE--EEKEETK 109

Query: 276 NAEQNEVYTEQQTSSS 291
             E  E  +   +SSS
Sbjct: 110 KEESKESSSSDSSSSS 125

 Score = 20.4 bits (41), Expect = 0.14
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 245 IEGNKEE-----YIEENNDEYMDESMETYEDNESEYNAEQNEVYTEQQTSSS 291
           ++GNK+E       +E   + +  S      + S  +  ++E  +E ++SSS
Sbjct: 7   VKGNKKEVKASKQAKEEKAKAVSSSSSESSSSSSSSSESESESESESESSSS 58

 Score = 16.2 bits (30), Expect = 2.7
 Identities = 5/16 (31%), Positives = 9/16 (56%)

Query: 322 DTDDAEEIIVQHGDKI 337
           D D   E+  +HG+ +
Sbjct: 279 DRDAIFELFAKHGEVV 294

Lambda     K      H
   0.307    0.127    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 374
Number of extensions: 34
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 9
Length of query: 555
Length of database: 414
Length adjustment: 34
Effective length of query: 521
Effective length of database: 380
Effective search space:   197980
Effective search space used:   197980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.5 bits)
S2: 26 (14.6 bits)