>YDL081C RPP1A SGDID:S000002239, Chr IV from 310122-309802, reverse
           complement, Verified ORF, "Ribosomal protein P1 alpha, a
           component of the ribosomal stalk, which is involved in
           the interaction between translational elongation factors
           and the ribosome; accumulation of P1 in the cytoplasm is
           regulated by phosphorylation and interaction with the P2
           stalk component"
          Length = 106

 Score = 45.8 bits (107), Expect = 2e-10
 Identities = 30/102 (29%), Positives = 46/102 (45%)

Query: 16  ELLCTYAALILHEEKMSITSDNILKLIKNSNNTVLPYLPMLFERALKGKDIQSLLSNLSV 75
           E   +YAALIL + ++ I+S+ +L L   +N  V      +F +AL G++++ LL N S 
Sbjct: 4   ESALSYAALILADSEIEISSEKLLTLTNAANVPVENIWADIFAKALDGQNLKDLLVNFSA 63

Query: 76  GSAPAAAAQVTTXXXXXXXXXXXXXXXXXXXXXXDDLGFSLF 117
           G+A  A                            DD+GF LF
Sbjct: 64  GAAAPAGVAGGVAGGEAGEAEAEKEEEEAKEESDDDMGFGLF 105

Lambda     K      H
   0.315    0.130    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 106
Length adjustment: 12
Effective length of query: 106
Effective length of database: 94
Effective search space:     9964
Effective search space used:     9964
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.3 bits)
S2: 14 (10.0 bits)