>YDL130W RPP1B SGDID:S000002288, Chr IV from
           229906-230019,230321-230527, Verified ORF, "Ribosomal
           protein P1 beta, component of the ribosomal stalk, which
           is involved in interaction of translational elongation
           factors with ribosome; accumulation is regulated by
           phosphorylation and interaction with the P2 stalk
           component"
          Length = 106

 Score = 42.4 bits (98), Expect = 2e-09
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 18  LCTYAALILHEEKMSITSDNILKLIKNSNNTVLPYLPMLFERALKGKDIQSLLSNL-SVG 76
           + ++AA IL +  + ITSDN+L + K +   V      ++ +AL+GKD++ +LS   + G
Sbjct: 5   IISFAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNAG 64

Query: 77  SAPAAAAQVTTXXXXXXXXXXXXXXXXXXXXXXDDLGFSLF 117
               A A                          DD+GF LF
Sbjct: 65  PVAGAGAASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLF 105

Lambda     K      H
   0.315    0.130    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 106
Length adjustment: 12
Effective length of query: 106
Effective length of database: 94
Effective search space:     9964
Effective search space used:     9964
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.3 bits)
S2: 14 (10.0 bits)