>YHR203C RPS4B SGDID:S000001246, Chr VIII from
           505530-505517,505247-504476, reverse complement,
           Verified ORF, "Protein component of the small (40S)
           ribosomal subunit; identical to Rps4Bp and has
           similarity to rat S4 ribosomal protein"
          Length = 261

 Score =  308 bits (788), Expect = 1e-88
 Identities = 148/253 (58%), Positives = 192/253 (75%)

Query: 24  KGIKKHLKRVNAPSHWMLNKMGGQYAPKTSSGPHKLLESIPLVILLRNRLKYALTFDEVK 83
           +G KKHLKR+ AP HW+L+K+ G YAP+ S+GPHKL ES+PL++ LRNRLKYAL   EVK
Sbjct: 3   RGPKKHLKRLAAPHHWLLDKLSGCYAPRPSAGPHKLRESLPLIVFLRNRLKYALNGREVK 62

Query: 84  MILIQKIVKVDNKVRTDCTFPVGLMDVIHITKSNEYFRLLYDIKGRFVPHRITNEESKYK 143
            IL+Q+ VKVD KVRTD T+P G MDVI +  +NE FRL+YD+KGRF  HRIT+EE+ YK
Sbjct: 63  AILMQRHVKVDGKVRTDTTYPAGFMDVITLDATNENFRLVYDVKGRFAVHRITDEEASYK 122

Query: 144 LCKVKKILLRKGRLSIAVTHDGRSIPYIHPDVKVNDTVRLDLETGKVLEHLKFQVGSLVM 203
           L KVKK+ L K  +   VTHDGR+I Y  P++KVNDTV++DL +GK+ + +KF  G LV 
Sbjct: 123 LGKVKKVQLGKKGVPYVVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVY 182

Query: 204 VTAGHSVGRVGVISSIDKNMGTYDIIHVKDSRNKVFATRLSNVFVIGDNTKPYISLPREK 263
           VT G ++GR+G I   +++ G +D++H+KDS +  F TRL+NVFVIG+  KPYISLP+ K
Sbjct: 183 VTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGK 242

Query: 264 GIKLDIIEERRNR 276
           GIKL I EER  R
Sbjct: 243 GIKLSIAEERDRR 255

 Score = 14.6 bits (26), Expect = 2.4
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 23  GKGIK 27
           GKGIK
Sbjct: 241 GKGIK 245

Lambda     K      H
   0.322    0.140    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 278
Number of extensions: 10
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 282
Length of database: 261
Length adjustment: 25
Effective length of query: 257
Effective length of database: 236
Effective search space:    60652
Effective search space used:    60652
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.6 bits)
S2: 21 (12.7 bits)