Query= PF11_0086 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(3334 letters)
>YGR162W TIF4631 SGDID:S000003394, Chr VII from 824064-826922,
Verified ORF, "Translation initiation factor eIF4G,
subunit of the mRNA cap-binding protein complex (eIF4F)
that also contains eIF4E (Cdc33p); associates with the
poly(A)-binding protein Pab1p, also interacts with eIF4A
(Tif1p); homologous to Tif4632p"
Length = 952
Score = 74.3 bits (181), Expect = 1e-16
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 49/305 (16%)
Query: 2671 NSWILKQNQLKADKYTC------------MMRKLRGILNKLTFEKFDLLYEQIILVGITK 2718
N W+ K K +K + RK++ +LNKLT E FD + +I+ +
Sbjct: 577 NRWVPKFKSKKTEKKLAPDGKTELLDKDEVERKMKSLLNKLTLEMFDAISSEILAIANIS 636
Query: 2719 LDEIIG-----LMKLVFEKAVTQHHFVQMYVQLCKKLNVHFHNMKLEDDTT------VQF 2767
+ E G +++ +F KA + H+ MY QLC K+ V N + D+T
Sbjct: 637 VWETNGETLKAVIEQIFLKACDEPHWSSMYAQLCGKV-VKELNPDITDETNEGKTGPKLV 695
Query: 2768 KKILINQCQDSFE----NNLKPIEFPSHLNEE---EKFEFEQMHKNKVRGNMLFVGELVK 2820
L+ +C F+ + L E + L E E++ K + G + F+G L +
Sbjct: 696 LHYLVARCHAEFDKGWTDKLPTNEDGTPLEPEMMSEEYYAAASAKRRGLGLVRFIGFLYR 755
Query: 2821 SGIISIPIVFVCIKQLLEKRESYISIKNDTKEGNLHLEALCMFLNTVGEILDTHEKANQE 2880
+++ ++F C ++L++ S + LE++ LNTVGE +T +
Sbjct: 756 LNLLTGKMMFECFRRLMKDLTDSPSEET--------LESVVELLNTVGEQFETDSFRTGQ 807
Query: 2881 KVKE-------LYNTLNELVNNESITFRVRCLIKDVIDNRNEK-WNKKFAHKLEGPTTLS 2932
E L+ L+ ++ I+ R++ + D+ + R++K WN K GP T+
Sbjct: 808 ATLEGSQLLDSLFGILDNIIQTAKISSRIKFKLIDIKELRHDKNWNSD--KKDNGPKTIQ 865
Query: 2933 VLHDK 2937
+H++
Sbjct: 866 QIHEE 870
Score = 25.0 bits (53), Expect = 0.086
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 1671 THNRKDEKKEDTTNNVDSKKNDMNDPKSIDALTENENNKNDAECSDSTTVKNKKGKRTST 1730
T + + E K T++ S P + D+ +E N ++AE + ++ K ++ +
Sbjct: 161 TVSPQPESKLKETSDSTSTSTPTPTPSTNDSKASSEENISEAEKTRRNFIEQVKLRKAAL 220
Query: 1731 NNVSSNSLKNES------MKSSTTNKEQVSKD 1756
L+ S MK++ N E+ D
Sbjct: 221 EKKRKEQLEGSSGNNNIPMKTTPENVEEKGSD 252
Score = 19.6 bits (39), Expect = 3.6
Identities = 6/32 (18%), Positives = 19/32 (59%)
Query: 1214 IPNTHKEDYKNNRYVNNNKILEDKNSSNANKN 1245
I H+E+ + + NN++ + ++++N++
Sbjct: 864 IQQIHEEEERQRQLKNNSRSNSRRTNNSSNRH 895
Score = 18.5 bits (36), Expect = 8.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 2910 IDNRNEKWNKKFAHKLEGPTTLSVLHDKI 2938
I+ + K+ K+ GPT L DK+
Sbjct: 436 IEGPDIKYKKEHVKYTYGPTFLLQFKDKL 464
Lambda K H
0.309 0.127 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4229
Number of extensions: 188
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 3334
Length of database: 952
Length adjustment: 53
Effective length of query: 3281
Effective length of database: 899
Effective search space: 2949619
Effective search space used: 2949619
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (19.0 bits)
S2: 36 (18.5 bits)