>YER095W RAD51 SGDID:S000000897, Chr V from 349976-351178, Verified
           ORF, "Strand exchange protein, forms a helical filament
           with DNA that searches for homology; involved in the
           recombinational repair of double-strand breaks in DNA
           during vegetative growth and meiosis; homolog of Dmc1p
           and bacterial RecA protein"
          Length = 400

 Score =  374 bits (959), Expect = e-108
 Identities = 187/330 (56%), Positives = 233/330 (70%)

Query: 37  DEIEEEQLYTGPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAPMRTLCAIKGISEQX 96
           DE  +E      + IE+L   G    D++ L+E GL T E VAYAP + L  IKGISE  
Sbjct: 69  DEAYDEAALGSFVPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKDLLEIKGISEAK 128

Query: 97  XXXXXXXXXXXXNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITELFGEFR 156
                         GF  A D+H  R  LI  TTGSK LD LL GG+ETG ITELFGEFR
Sbjct: 129 ADKLLNEAARLVPMGFVTAADFHMRRSELICLTTGSKNLDTLLGGGVETGSITELFGEFR 188

Query: 157 TGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTDCLNNIA 216
           TGKSQLCHTLA+TCQ+P++  GGEGKCL+IDTEGTFRP R+V+IA+R+GL P D LNN+A
Sbjct: 189 TGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVA 248

Query: 217 YAKAYNCDHQTELLIDASAMMADARFALLIVDSATALYRSEYIGRGELANRQSHLCRFLR 276
           YA+AYN DHQ  LL  A+ MM+++RF+L++VDS  ALYR+++ GRGEL+ RQ HL +F+R
Sbjct: 249 YARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMR 308

Query: 277 GLQRIADIYGVAVIITNQVVAKVDAMSMFGGHEKIPIGGNIIAHASQTRLYLRKGRGESR 336
            LQR+AD +GVAV++TNQVVA+VD    F    K PIGGNI+AH+S TRL  +KG+G  R
Sbjct: 309 ALQRLADQFGVAVVVTNQVVAQVDGGMAFNPDPKKPIGGNIMAHSSTTRLGFKKGKGCQR 368

Query: 337 ICKIYDSPVLPEGEAVFAITEGGIADYEEK 366
           +CK+ DSP LPE E VFAI E G+ D  E+
Sbjct: 369 LCKVVDSPCLPEAECVFAIYEDGVGDPREE 398

Lambda     K      H
   0.320    0.137    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 419
Number of extensions: 16
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 400
Length adjustment: 30
Effective length of query: 336
Effective length of database: 370
Effective search space:   124320
Effective search space used:   124320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)