Query= PF11_0090 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein (643 letters)
>YGR103W NOP7 SGDID:S000003335, Chr VII from 695421-697238, Verified
           ORF, "Nucleolar protein involved in rRNA processing and
           60S ribosomal subunit biogenesis; constituent of several
           different pre-ribosomal particles"
          Length = 605

 Score =  200 bits (508), Expect = 2e-55
 Identities = 160/628 (25%), Positives = 283/628 (45%), Gaps = 96/628 (15%)

Query: 25  LRKLFLNEEEFRKLCIFKGIYPKDFKEIPLKYRKKFYKHKVFYTRNDFLKLSHEKIINDF 84
           +RKL ++  +FR+LCIFKGIYP++ +    K  K       FY   D   L HE ++  F
Sbjct: 22  VRKLQVSLADFRRLCIFKGIYPREPRN-KKKANKGSTAPTTFYYAKDIQYLMHEPVLAKF 80

Query: 85  RXXXXXXXXXXXXXXTLEDFTRSKNIVANFPVYKLEHIIKERYPILSYAVDHLDDALSCI 144
           R                E  + +K +  N   Y L+HIIKERYP    A+  +DDAL+ +
Sbjct: 81  REHKTFARKLTRALGRGE-VSSAKRLEENRDSYTLDHIIKERYPSFPDAIRDIDDALNML 139

Query: 145 IAYSQLPSNHKYGIKNNMVKTCEMLKDHFHYYVYKTNRIKKAFISVKGYYLQAEILKKKV 204
             +S LPS ++  + + ++   + + + +  YV K   ++K F+S+KG Y QA I  ++V
Sbjct: 140 FLFSNLPSTNQ--VSSKIINDAQKICNQWLAYVAKERLVRKVFVSIKGVYYQANIKGEEV 197

Query: 205 TWIIPHIFTPYLDTSIDFKLISDFIEYYIAXXXXXXXXXXXXDNMLYPPKQDNDLKNEKL 264
            W++P  F   + + +DF+++  F+E+Y                ++YPPK   DLK +K+
Sbjct: 198 RWLVPFKFPENIPSDVDFRIMLTFLEFYSTLLHFVLYKLYTDSGLIYPPKL--DLKKDKI 255

Query: 265 ---------------AHLSYDKDYSTNENNIDINMNQELQSKCN---VNTNE-DLNTCQE 305
                          + L  D      +  ++      L+S  N    NT+E +    QE
Sbjct: 256 ISGLSSYILESRQEDSLLKLDPTEIEEDVKVESLDASTLKSALNADEANTDETEKEEEQE 315

Query: 306 KTKEKNHKSDNNPHEXXXXXXXXXXXXXXXXXXCDLNKNEGKNLTNNIIHKNSEADNGHV 365
           K +EK  + + N                      D NKN+G     +I+ + S+ D    
Sbjct: 316 KKQEKEQEKEQNEETELDTFE-------------DNNKNKG-----DILIQPSKYD---- 353

Query: 366 HPDDHIDIDEHNKLKELFKNHIFYIHNDMPFDVLSIIILSCGGKISWNSRISPIH----Y 421
                      + +  LF   +FY+  ++P D+L  +ILSCGG +   + +  I      
Sbjct: 354 -----------SPVASLFSAFVFYVSREVPIDILEFLILSCGGNVISEAAMDQIENKKDI 402

Query: 422 DDNNITHEIYEKD--KNTIHLNNPENEYKRIHIQPQYIFDCLNEKNILPCSDYLTEKENL 479
           D + +TH+I ++   KN +          R +IQPQ+IFDC+N+  ++P + YL   E L
Sbjct: 403 DMSKVTHQIVDRPVLKNKV--------AGRTYIQPQWIFDCINKGELVPANKYL-PGEAL 453

Query: 480 PVHLSPFIEDENFKNLVKKEEYTINKMLNQKIKEEQYKDFSKENNNIFKSPNYKXXXXXX 539
           P HLSP+ +   +      EE            EE+  +   E+ +  +  + +      
Sbjct: 454 PPHLSPWGDAIGYDPTAPVEE-----------GEEEESESESESEDQVEEEDQEVVAGEE 502

Query: 540 NDDRETANLILNNKRQAALNNQLERENEDINQLKENDTILNKQTDQTQILKTQNLKSQEQ 599
           +DD +        + QA    +LE +    ++  E D  +NK  +     K + +  +E+
Sbjct: 503 DDDDD-------EELQAQKELELEAQGIKYSETSEADKDVNKSKN-----KKRKVDEEEE 550

Query: 600 EIQRHKIVLSKKKRKLFARIDMAQKRQK 627
           E +   I++S K++KL+ ++  +  +++
Sbjct: 551 EKKLKMIMMSNKQKKLYKKMKYSNAKKE 578

 Score = 16.5 bits (31), Expect = 3.6
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 159 KNNMVKTCEMLKDHFHYYVYKTNRIKKAFISVKGYYL----QAEILKKK 203
           KN   K  E  ++     +  +N+ KK +  +K        QAE LKKK
Sbjct: 539 KNKKRKVDEEEEEKKLKMIMMSNKQKKLYKKMKYSNAKKEEQAENLKKK 587
Lambda     K      H
   0.317    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1143
Number of extensions: 77
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 2
Length of query: 643
Length of database: 605
Length adjustment: 37
Effective length of query: 606
Effective length of database: 568
Effective search space:   344208
Effective search space used:   344208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.7 bits)
S2: 28 (15.4 bits)