Query= PF11_0101 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(463 letters)
>YBR155W CNS1 SGDID:S000000359, Chr II from 549765-550922, Verified
ORF, "TPR-containing co-chaperone; binds both Hsp82p
(Hsp90) and Ssa1p (Hsp70) and stimulates the ATPase
activity of SSA1, ts mutants reduce Hsp82p function
while over expression suppresses the phenotypes of an
HSP82 ts allele and a cpr7 deletion"
Length = 385
Score = 35.0 bits (79), Expect = 4e-06
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 208 KVLLSDLYCNRAIIHYKKKRYIKCLDDCXXXXXXXXXXXXXLY---FGILSCNNMEMYHD 264
K + LY NRA + K Y +C++DC Y N +E
Sbjct: 117 KSINESLYANRAACELELKNYRRCIEDCSKALTINPKNVKCYYRTSKAFFQLNKLEEAKS 176
Query: 265 ACKYIN-KFDELLKNIQDIESYINVQEYEKLKKDIFEKYEHYLRRKKK 311
A + N + D K+I ++ S I+ +E E K+ ++ E R KK
Sbjct: 177 AATFANQRIDPENKSILNMLSVIDRKEQELKAKEEKQQREAQERENKK 224
Score = 34.7 bits (78), Expect = 6e-06
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 31 PLFM---DELPKNLEENEDLEALYKIITSEDNPLILAHDYKEVGNDYFKDGIKYYDDAVI 87
P FM DE EN +LEAL K + E P +A ++K+ GN+ +K K + DA
Sbjct: 48 PFFMTKLDETDGAGGENVELEAL-KALAYEGEPHEIAENFKKQGNELYK--AKRFKDARE 104
Query: 88 SYNKGIDI 95
Y+KG+ +
Sbjct: 105 LYSKGLAV 112
Score = 16.5 bits (31), Expect = 1.6
Identities = 4/14 (28%), Positives = 10/14 (71%)
Query: 159 NNINNKTNDDVFKQ 172
+ +KT+D++ K+
Sbjct: 30 SEFKDKTSDEILKE 43
Score = 15.8 bits (29), Expect = 2.7
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 391 MDYYDIIKKRRDNQILY 407
+ ++DI+KK + L+
Sbjct: 337 LTFHDILKKESPDVPLF 353
Lambda K H
0.322 0.141 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 315
Number of extensions: 17
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 463
Length of database: 385
Length adjustment: 32
Effective length of query: 431
Effective length of database: 353
Effective search space: 152143
Effective search space used: 152143
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.5 bits)
S2: 25 (14.2 bits)