Query= PF11_0105 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(440 letters)
>YBR247C ENP1 SGDID:S000000451, Chr II from 714450-712999, reverse
complement, Verified ORF, "Protein associated with U3
and U14 snoRNAs, required for pre-rRNA processing and
40S ribosomal subunit synthesis; localized in the
nucleus and concentrated in the nucleolus"
Length = 483
Score = 152 bits (383), Expect = 3e-41
Identities = 83/256 (32%), Positives = 133/256 (51%), Gaps = 11/256 (4%)
Query: 175 VEKCYRTIGEDLAHYKSGKLHRALTILTKSSKWYEYLLLTKPKKWTAHATFEITKLFSSG 234
V K Y T+G L + GKL + ++ W + + +T P++W+ H +E TKLF S
Sbjct: 210 VIKAYTTVGSILKTWTHGKLPKLFKVIPSLRNWQDVIYVTNPEEWSPHVVYEATKLFVSN 269
Query: 235 LKEKEVSKFYEFILLPIVLENIDKNK--KLDAFLYKALIKALYKSKSWFKGILFPILHRE 292
L KE KF ILL +NI+ ++ L+ +Y+A+ K+LYK ++FKG LFP++
Sbjct: 270 LTAKESQKFINLILLERFRDNIETSEDHSLNYHIYRAVKKSLYKPSAFFKGFLFPLVETG 329
Query: 293 CTKKQMIIIGSVIQKMSISINCVVLALDEIFSFSWNSIISYILILLFNKKYAFTKQCIDN 352
C ++ I GSV+ K+S+ AL + ++ + + +L +KKYA Q +D+
Sbjct: 330 CNVREATIAGSVLAKVSVPALHSSAALSYLLRLPFSPPTTVFIKILLDKKYALPYQTVDD 389
Query: 353 CVNYFLRFENYQD---------VLSINWHKSLLTLVHNYRGLMCDTQVEALTHLVKKKNH 403
CV YF+RF D VL + WHK+ LT Y+ + Q + L V+++ H
Sbjct: 390 CVYYFMRFRILDDGSNGEDATRVLPVIWHKAFLTFAQRYKNDITQDQRDFLLETVRQRGH 449
Query: 404 HQISSEIMKHLYSPTS 419
I EI + L + S
Sbjct: 450 KDIGPEIRRELLAGAS 465
Score = 14.2 bits (25), Expect = 9.5
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 142 IKIMNDSKH 150
IKI+ D K+
Sbjct: 372 IKILLDKKY 380
Lambda K H
0.320 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 375
Number of extensions: 17
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 440
Length of database: 483
Length adjustment: 33
Effective length of query: 407
Effective length of database: 450
Effective search space: 183150
Effective search space used: 183150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)