Query= PF11_0106 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) 60S Ribosomal
protein L36, putative
(112 letters)
>YMR194W RPL36A SGDID:S000004807, Chr XIII from
651144-651159,651623-651909, Verified ORF, "N-terminally
acetylated protein component of the large (60S)
ribosomal subunit, nearly identical to Rpl36Bp and has
similarity to rat L36 ribosomal protein; binds to 5.8 S
rRNA"
Length = 100
Score = 66.6 bits (161), Expect = 8e-17
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 11 TGIAVGFNSGHVVTXXXXXXXXXXXXXXXXX--ELIKDVVREITGFSPYEKRIIELIKIG 68
TGIA+G N G VT + ++ +VREI G SPYE+R+I+LI+
Sbjct: 5 TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIR-- 62
Query: 69 TSASTKRSLKYAKKKLGTHKRGKAKREEIQKVVILQRR 106
++ KR+ K AKK+LG+ R KAK EE+ ++ RR
Sbjct: 63 -NSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
Lambda K H
0.315 0.132 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 112
Length of database: 100
Length adjustment: 11
Effective length of query: 101
Effective length of database: 89
Effective search space: 8989
Effective search space used: 8989
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.3 bits)
S2: 14 (10.0 bits)