Query= PF11_0250 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) high mobility
group-like protein NHP2, putative
(145 letters)
>YEL026W SNU13 SGDID:S000000752, Chr V from 101943-102323, Verified
ORF, "RNA binding protein, part of U3 snoRNP involved in
rRNA processing, part of U4/U6-U5 tri-snRNP involved in
mRNA splicing, similar to human 15.5K protein"
Length = 126
Score = 155 bits (391), Expect = 3e-43
Identities = 74/120 (61%), Positives = 96/120 (80%)
Query: 26 KIFPLASPELTNQILDVIQRATVYRQLKRGANEAVKSLHKGISELVVLAADAKPLEIISH 85
K FPLA LT QILDV+Q+A RQLK+GANEA K+L++GISE +++AAD +P+EI+ H
Sbjct: 7 KAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLH 66
Query: 86 IPLVCEDKNTPYVYVRSKMALGRACGISRSVIATSIVTKDGSPLETQITELKDLIEQMLI 145
+PL+CEDKN PYV+V S++ALGRACG+SR VIA SI T D S ++TQI +KD IE +LI
Sbjct: 67 LPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKTQIYAVKDKIETLLI 126
Lambda K H
0.318 0.133 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 126
Length adjustment: 15
Effective length of query: 130
Effective length of database: 111
Effective search space: 14430
Effective search space used: 14430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)