Query= PF11_0258 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) co-chaperone
GrpE, putative
(294 letters)
>YOR232W MGE1 SGDID:S000005758, Chr XV from 774574-775260, Verified
ORF, "Protein of the mitochondrial matrix involved in
protein import into mitochondria; acts as a cochaperone
and a nucleotide release factor for Ssc1p; homolog of E.
coli GrpE"
Length = 228
Score = 114 bits (286), Expect = 2e-30
Identities = 56/152 (36%), Positives = 90/152 (59%)
Query: 141 NEIKKTKRDMEEKMVDNKVLKEKYLSVLAENENLRNRYMKEIETSKLYCISNFAKSLLDV 200
+EIKK + + K + LK++ L +A+ NL+ K+I+ +K + + FAK LL+
Sbjct: 65 SEIKKLESQLSAKTKEASELKDRLLRSVADFRNLQQVTKKDIQKAKDFALQKFAKDLLES 124
Query: 201 ADNLSLAIKNINEESLKTNEEINNIYKGIEMTETILHNIFNKYGIDKYNPINEKFNPQLH 260
DN A+ EE L+ ++EI+++Y G+ MT + N K+GI+K +P+ E F+P H
Sbjct: 125 VDNFGHALNAFKEEDLQKSKEISDLYTGVRMTRDVFENTLRKHGIEKLDPLGEPFDPNKH 184
Query: 261 EAIFEINDSTKEKGTVATVIQHGYKIKDRILR 292
EA FE+ KE GTV V Q G+ + DR++R
Sbjct: 185 EATFELPQPDKEPGTVFHVQQLGFTLNDRVIR 216
Score = 17.3 bits (33), Expect = 0.34
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 212 NEESLKTNEEINNIYKGIEMTETIL 236
+EES + NE++ I+ E+ L
Sbjct: 50 SEESKENNEDLTEEQSEIKKLESQL 74
Score = 16.9 bits (32), Expect = 0.44
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 265 EINDSTKEKGTVATVIQHGYKIKDRILR 292
E ++ K + ++ + ++KDR+LR
Sbjct: 63 EQSEIKKLESQLSAKTKEASELKDRLLR 90
Score = 12.7 bits (21), Expect = 8.3
Identities = 4/13 (30%), Positives = 8/13 (61%)
Query: 28 RARYFLTFCKNEK 40
R R++ K+E+
Sbjct: 40 RMRFYSDEAKSEE 52
Lambda K H
0.316 0.133 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 120
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 294
Length of database: 228
Length adjustment: 24
Effective length of query: 270
Effective length of database: 204
Effective search space: 55080
Effective search space used: 55080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)