>YOR294W RRS1 SGDID:S000005820, Chr XV from 868339-868950, Verified
           ORF, "Essential protein that binds ribosomal protein L11
           and is required for nuclear export of the 60S
           pre-ribosomal subunit during ribosome biogenesis; mouse
           homolog shows altered expression in Huntington's disease
           model mice"
          Length = 203

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 16/162 (9%)

Query: 14  DNSIINDENEIKAKVEQNLPLIFSKINKLQKEKEDE-------EDIIYSVTN--DNIFNM 64
           D+S    E +IK+    N+ L+ +++  L  +   E       +  + ++    D   ++
Sbjct: 40  DSSNARREEKIKSLTRDNVQLLINQLLSLPMKTTTESVGGTGGQSSVMTLLQLPDPTTDL 99

Query: 65  PRYSRIPKEKKKTKWQLFAENK-LRMKKNKSGLIYDKVSKGWVRRFQKK--QIKLNEQKN 121
           PR   +PK K  TKW+ FA  K ++ K+    +IYD+ S  WV ++  K    KL++Q  
Sbjct: 100 PREKPLPKAKAMTKWEKFAAKKGIKPKERAGKMIYDEASGEWVPKWGYKGANKKLDDQWL 159

Query: 122 NFVHE-YKNKEDIYEDP--FEKEQEEKDIKK-MKQKMRELKN 159
             V +  K  ++   DP    + + ++ +KK  KQ+ R +KN
Sbjct: 160 VEVDDKVKGTDNELIDPRTLNRAERKRLVKKNEKQQRRNMKN 201

 Score = 13.9 bits (24), Expect = 2.7
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 126 EYKNKEDIYEDPFEKEQEEKDIKKMKQKMRELKNKFDQKGISTED-IKYIQR 176
           +YKN     E P     +  ++      + + KN  D      E+ IK + R
Sbjct: 5   DYKNLPVTVEKPIPVVYDLGNLAAFDSNVLD-KNDLDSSNARREEKIKSLTR 55

Lambda     K      H
   0.312    0.130    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 164
Number of extensions: 8
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 246
Length of database: 203
Length adjustment: 22
Effective length of query: 224
Effective length of database: 181
Effective search space:    40544
Effective search space used:    40544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)