Query= PF11_0260 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L35, putative
(105 letters)
>YDL191W RPL35A SGDID:S000002350, Chr IV from
117665-117667,118159-118518, Verified ORF, "Protein
component of the large (60S) ribosomal subunit,
identical to Rpl35Bp and has similarity to rat L35
ribosomal protein"
Length = 120
Score = 51.2 bits (121), Expect = 4e-12
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 MSNVKAYELRTXXXXXXXXXXXXXXXXXSGLRISKALGNSAKNSKIHGVRKNVARVLTVY 60
M+ VKAYELRT + L++ K S KI VRK++A VLTV
Sbjct: 1 MAGVKAYELRTKSKEQLASQLVDLKKELAELKVQKLSRPSLP--KIKTVRKSIACVLTVI 58
Query: 61 NQKRKMELRQLYKNKKFKP 79
N++++ +RQLYK KK++P
Sbjct: 59 NEQQREAVRQLYKGKKYQP 77
Lambda K H
0.315 0.126 0.335
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 120
Length adjustment: 12
Effective length of query: 93
Effective length of database: 108
Effective search space: 10044
Effective search space used: 10044
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.3 bits)
S2: 14 (10.0 bits)