Query= PF11_0270 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) threonine --
tRNA ligase, putative
(1013 letters)
>YIL078W THS1 SGDID:S000001340, Chr IX from 212496-214700, Verified
ORF, "Threonyl-tRNA synthetase, essential cytoplasmic
protein"
Length = 734
Score = 536 bits (1380), Expect = e-156
Identities = 248/465 (53%), Positives = 336/465 (72%), Gaps = 15/465 (3%)
Query: 333 LWDLNVPLLGNC----RVEFINIQSEEGQKIFWHSSAHILGSSLEKLFGGFLTIGPALKE 388
LWDL+ P G ++E ++ +S+EG+K+FWHSSAH+LG S E G + +GP +
Sbjct: 118 LWDLDRPFEGEANEEIKLELLDFESDEGKKVFWHSSAHVLGESCECHLGAHICLGPPTDD 177
Query: 389 GFYYDIFLNNF----------SINNEDYKRIEDEFNKLVKDNVPFEKVICTKEEALELFD 438
GF+Y++ + + +++ D+ +E ++K FE+++ +KE+ L++F
Sbjct: 178 GFFYEMAVRDSMKDISESPERTVSQADFPGLEGVAKNVIKQKQKFERLVMSKEDLLKMFH 237
Query: 439 YNPFKLELIRSKIPDNKKTSVYRCGNFIDLCLGPHIKNTGKVKTFKVLKNSSAYWLGQKE 498
Y+ +K L+++K+PD T+VYRCG IDLC+GPHI +TG++K FK+LKNSS Y+LG
Sbjct: 238 YSKYKTYLVQTKVPDGGATTVYRCGKLIDLCVGPHIPHTGRIKAFKLLKNSSCYFLGDAT 297
Query: 499 NDSLQRVYGISFQKKSELVEYLKFLEEAKKRDHRNVGKILNLFFFEKETSPGSCFWLPHG 558
NDSLQRVYGISF K + +LKFL EA RDHR +GK LF F E SPGSCFWLPHG
Sbjct: 298 NDSLQRVYGISFPDKKLMDAHLKFLAEASMRDHRKIGKEQELFLFN-EMSPGSCFWLPHG 356
Query: 559 SKIYNKLIEFIRKEYRIRKYEEVISPNVFSCDLWKTSGHYQNYKDCMFLFNVENKEWGMK 618
++IYN L++ +R EYR R YEEVI+PN+++ LW+TSGH+ NYK+ MF F VE + +G+K
Sbjct: 357 TRIYNTLVDLLRTEYRKRGYEEVITPNMYNSKLWETSGHWANYKENMFTFEVEKETFGLK 416
Query: 619 PMNCPGHCLMFKQLNVSYRSLPVRLADFGVLHRNEISGSLSGLTRVRRFQQDDSHIFCSM 678
PMNCPGHCLMFK SYR LP R+ADFGV+HRNE SG+LSGLTRVRRFQQDD+HIFC+
Sbjct: 417 PMNCPGHCLMFKSRERSYRELPWRVADFGVIHRNEFSGALSGLTRVRRFQQDDAHIFCTH 476
Query: 679 EHIKQEVLNTLNFLFYVYNLFGFKYELFLSTRPKKFIGQISTWNLAEQHLKDALYAANVQ 738
+ I+ E+ N NFL Y+Y +FGF++++ LSTRP+K++G+I TW+ AE L+ AL
Sbjct: 477 DQIESEIENIFNFLQYIYGVFGFEFKMELSTRPEKYVGKIETWDAAESKLESALKKWGGN 536
Query: 739 WKINEGDGAFYGPKIDILVKDSLNRTHQCGTIQLDFQLPVRFNLQ 783
W+IN GDGAFYGPKIDI++ D+L R HQC TIQLDFQLP RF L+
Sbjct: 537 WEINAGDGAFYGPKIDIMISDALRRWHQCATIQLDFQLPNRFELE 581
Score = 134 bits (338), Expect = 2e-35
Identities = 64/136 (47%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 863 KGFERPIIIHRAILGSVERFVAILIEHTAGKLPFWLSPRQAIVLPIGDKYNDYANYVYET 922
+ +ERP++IHRAILGSVER AIL EH AGK PFWLSPRQ +V+P+G KY YA V
Sbjct: 590 ESYERPVMIHRAILGSVERMTAILTEHFAGKWPFWLSPRQVLVVPVGVKYQGYAEDVRNK 649
Query: 923 LHNNMFDVDLDTSVNTLNKKIREAQLKQFNYILVVGEKELTTNTVTLRDRD---DQNNQH 979
LH+ F D+D + NTL KK+R Q+ ++N+I +VGE+E+ +V +R+RD Q
Sbjct: 650 LHDAGFYADVDLTGNTLQKKVRNGQMLKYNFIFIVGEQEMNEKSVNIRNRDVMEQQGKNA 709
Query: 980 VYTIQELINKFNKLLD 995
+++E++ + L D
Sbjct: 710 TVSVEEVLKQLRNLKD 725
Score = 53.9 bits (128), Expect = 4e-11
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 14/124 (11%)
Query: 156 NNNCNTNDVEVMKKK---LVVGENPEFIKKRLEKFNEIKEKRKQELEENFEELRKPITIE 212
N+ N E K K L + P FI++R+E F+ ++++ ++ R P+ I
Sbjct: 22 NDAVKPNKKENKKSKQQSLYLDPEPTFIEERIEMFDRLQKEYNDKVASM---PRVPLKIV 78
Query: 213 LLDGSIKSGESYVTTPFDIALSISKRLAEDSIVCKVTYLEKVDVELCDIEEGDDHNEEAN 272
L DG++K S+ TTP DIA ISK LA+ +C + KV+ +L D++ EAN
Sbjct: 79 LKDGAVKEATSWETTPMDIAKGISKSLADR--LC----ISKVNGQLWDLDR--PFEGEAN 130
Query: 273 DEVE 276
+E++
Sbjct: 131 EEIK 134
Lambda K H
0.320 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1740
Number of extensions: 76
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 1013
Length of database: 734
Length adjustment: 42
Effective length of query: 971
Effective length of database: 692
Effective search space: 671932
Effective search space used: 671932
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.7 bits)
S2: 30 (16.2 bits)