Query= PF11_0272 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein S18, putative
(156 letters)
>FBgn0010411 type=protein;
loc=2R:join(16151613..16151615,16151752..16151937,
16151998..16152267); ID=FBpp0085586; name=RpS18-PA;
parent=FBgn0010411,FBtr0086274;
dbxref=FlyBase:FBpp0085586,
FlyBase_Annotation_IDs:CG8900-PA,GB_protein:AAF57491.1,
GB_protein:AAF57491;
MD5=97ba9ef101737c9989d87e4dd680b173; release=r5.1;
species=Dmel; length=152;
Length = 152
Score = 180 bits (456), Expect = 1e-50
Identities = 82/127 (64%), Positives = 107/127 (84%)
Query: 11 FQHILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIV 70
FQHILRI+NTN+DGK KV IA+TAIKG+G+R + ++ K+A+VD TKRAGE T EE+D +V
Sbjct: 9 FQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVV 68
Query: 71 HIMSTPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWG 130
I+S P Q+K+P+WFLNR+KD+ +GK + ++ LDS LR+DLER+KKIR HRGLRH+WG
Sbjct: 69 TIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWG 128
Query: 131 LRVRGQH 137
LRVRGQH
Sbjct: 129 LRVRGQH 135
Lambda K H
0.322 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 123
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 152
Length adjustment: 17
Effective length of query: 139
Effective length of database: 135
Effective search space: 18765
Effective search space used: 18765
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.8 bits)
S2: 17 (11.2 bits)