>YPR108W RPN7 SGDID:S000006312, Chr XVI from 742452-743741, Verified
           ORF, "Essential, non-ATPase regulatory subunit of the
           26S proteasome, similar to another S. cerevisiae
           regulatory subunit, Rpn5p, as well as to mammalian
           proteasome subunits"
          Length = 429

 Score =  238 bits (606), Expect = 3e-67
 Identities = 125/388 (32%), Positives = 215/388 (55%), Gaps = 25/388 (6%)

Query: 14  NSYPNFHLADLFYLLQLPNISINERNDLLQSLFDEIKKNHMYPYYNYICQELNLN----- 68
           N  PN+ +++  +LL    +SI +R +  + +  +IK+  M PYY Y+C+E  +N     
Sbjct: 19  NRVPNYEVSEKAFLLTQSKVSIEQRKEAAEFVLAKIKEEEMAPYYKYLCEEYLVNNGQSD 78

Query: 69  ---------------FDEEYFKSLKEKADEELNQIENKLSESAENFDS-LDNKNDVLLKA 112
                          FD+E +  L +K + ++ ++  K+ +  E+ +  L+     +   
Sbjct: 79  LEHDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLG 138

Query: 113 NFFCKISDKENAFKEYEETYKKGIGMGMKLDILLTMIRICIFYNDVKNLKKYLEQARTQM 172
            ++ +I DK+NA K   ++  K I  G K+D++LT+ R+  FYND   +K+ LE   + +
Sbjct: 139 EYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMI 198

Query: 173 EKGGDWERKNKLKIYEALNYIMIRNFAEASKILIDAASTFTATEIISYEKIIFYVVILGI 232
           EKGGDWER+N+ K Y  ++ + +RNF EA+K+L+D+ +TFT+ E+ SYE I  Y  + G+
Sbjct: 199 EKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIELTSYESIATYASVTGL 258

Query: 233 MTEERTVLDKKILNSSVILQI---TSSDEDLHTYLHSFYHCDYRTFMEKTIKIAMRVKRD 289
            T ERT L  K+++S  +L +   T++ + + +   S Y  DY ++    ++    V   
Sbjct: 259 FTLERTDLKSKVIDSPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIP 318

Query: 290 -RYLGRHYRYFIRNTRVRAYKQFLEPFKNVTLKNMAFAFGVXXXXXXXXXXXXXANGKLN 348
            +YL RH  +F+R  R + Y Q LE +K ++LK+MA AFGV              N +LN
Sbjct: 319 CKYLNRHADFFVREMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLN 378

Query: 349 CKIDKVNGSIESNQPNERNTMYQNTIKK 376
           C ID+VNG +E+N+P+ +N  Y   +K+
Sbjct: 379 CVIDRVNGIVETNRPDNKNAQYHLLVKQ 406

 Score = 15.4 bits (28), Expect = 3.2
 Identities = 4/10 (40%), Positives = 8/10 (80%)

Query: 4   NKEENCELNK 13
           NK+ NC +++
Sbjct: 374 NKQLNCVIDR 383

Lambda     K      H
   0.319    0.136    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 414
Number of extensions: 20
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 380
Length of database: 429
Length adjustment: 31
Effective length of query: 349
Effective length of database: 398
Effective search space:   138902
Effective search space used:   138902
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (13.9 bits)
S2: 24 (13.9 bits)