Query= PF11_0312 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L38e
(87 letters)
>YLR325C RPL38 SGDID:S000004317, Chr XII from 781379-781143,
reverse complement, Verified ORF, "Protein component of
the large (60S) ribosomal subunit, has similarity to
rat L38 ribosomal protein"
Length = 78
Score = 29.3 bits (64), Expect = 9e-06
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 1 MPKQITDIRKFLKISRKPD--TTAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVFADRK 58
M ++ITDI++FL+++R+ D T V +V D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 59 KAERIENSLLPSLK 72
KA+++ SL P+LK
Sbjct: 61 KAKKLIQSLPPTLK 74
Lambda K H
0.319 0.134 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 87
Length of database: 78
Length adjustment: 8
Effective length of query: 79
Effective length of database: 70
Effective search space: 5530
Effective search space used: 5530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 12 ( 5.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 12 ( 8.4 bits)
S2: 12 ( 9.2 bits)