Query= PF11_0313 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
phosphoprotein P0
(316 letters)
>FBgn0000100 type=protein;
loc=3L:join(22069388..22069441,22069516..22070415);
ID=FBpp0078134; name=RpLP0-PA;
parent=FBgn0000100,FBtr0078481;
dbxref=FlyBase:FBpp0078134,
FlyBase_Annotation_IDs:CG7490-PA,GB_protein:AAF51807.1,
GB_protein:AAF51807;
MD5=86e1796e988a2ee9e406941fb4905ecb; release=r5.1;
species=Dmel; length=317;
Length = 317
Score = 241 bits (615), Expect = 2e-68
Identities = 128/267 (47%), Positives = 173/267 (64%)
Query: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
M + +K K Y K+ L ++ K IV DNVGS QM ++R SLRG A +LMGKNT
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPID 120
+R A++ +L+ PQ+EKLLP +K N+GFVF K DL+E+R+ +L++K APAR G IAP+
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 121 VFIPPGPTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNM 180
V IP TG+ P TSFFQ+L I TKI KG IEI V ++K G+KV AS ATLL N+
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180
Query: 181 KPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHV 240
PFSYG+ V VYD G I+ ++LDI ED+ KF +GV+N+AA+ + G T AS PH
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHS 240
Query: 241 FVEAFKNIVALIIDSDYTFPLMENIKK 267
FKN++A+ ++ F IK+
Sbjct: 241 IANGFKNLLAIAATTEVEFKEATTIKE 267
Lambda K H
0.320 0.136 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 221
Number of extensions: 7
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 316
Length of database: 317
Length adjustment: 27
Effective length of query: 289
Effective length of database: 290
Effective search space: 83810
Effective search space used: 83810
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)