Query= PF11_0313 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal phosphoprotein P0 (316 letters)
>YLR340W RPP0 SGDID:S000004332, Chr XII from 805887-806825, Verified
           ORF, "Conserved ribosomal protein P0 similar to rat P0,
           human P0, and E. coli L10e; shown to be phosphorylated
           on serine 302"
          Length = 312

 Score =  235 bits (599), Expect = 1e-66
 Identities = 114/259 (44%), Positives = 171/259 (66%)

Query: 7   QQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALK 66
           ++KK  Y  KL   +++Y  + +V VDNV S QM  VRK LRG+A +LMGKNT +R A++
Sbjct: 5   REKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR 64

Query: 67  KNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPIDVFIPPG 126
             L  +P  EKLLP VK N+GFVF  + L+EI+N+I+ N+  APAR G +AP D+++   
Sbjct: 65  GFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAV 124

Query: 127 PTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNMKPFSYG 186
            TGM+P  TSFFQ+LG+ TKI +G IEI   V ++  G KV  S A+LL   N+ PF++G
Sbjct: 125 NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFG 184

Query: 187 VDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFK 246
           + V  VYD+G ++ + +LDITDE+++  F   VS +A++S A G  T  S  H  +  +K
Sbjct: 185 LTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYK 244

Query: 247 NIVALIIDSDYTFPLMENI 265
           +++A+ I + Y +P +E++
Sbjct: 245 DLLAVAIAASYHYPEIEDL 263
Lambda     K      H
   0.320    0.136    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 193
Number of extensions: 10
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 316
Length of database: 312
Length adjustment: 27
Effective length of query: 289
Effective length of database: 285
Effective search space:    82365
Effective search space used:    82365
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)