Query= PF11_0313 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
phosphoprotein P0
(316 letters)
>YLR340W RPP0 SGDID:S000004332, Chr XII from 805887-806825, Verified
ORF, "Conserved ribosomal protein P0 similar to rat P0,
human P0, and E. coli L10e; shown to be phosphorylated
on serine 302"
Length = 312
Score = 235 bits (599), Expect = 1e-66
Identities = 114/259 (44%), Positives = 171/259 (66%)
Query: 7 QQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALK 66
++KK Y KL +++Y + +V VDNV S QM VRK LRG+A +LMGKNT +R A++
Sbjct: 5 REKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR 64
Query: 67 KNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPIDVFIPPG 126
L +P EKLLP VK N+GFVF + L+EI+N+I+ N+ APAR G +AP D+++
Sbjct: 65 GFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAV 124
Query: 127 PTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNMKPFSYG 186
TGM+P TSFFQ+LG+ TKI +G IEI V ++ G KV S A+LL N+ PF++G
Sbjct: 125 NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFG 184
Query: 187 VDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFK 246
+ V VYD+G ++ + +LDITDE+++ F VS +A++S A G T S H + +K
Sbjct: 185 LTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYK 244
Query: 247 NIVALIIDSDYTFPLMENI 265
+++A+ I + Y +P +E++
Sbjct: 245 DLLAVAIAASYHYPEIEDL 263
Lambda K H
0.320 0.136 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 193
Number of extensions: 10
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 316
Length of database: 312
Length adjustment: 27
Effective length of query: 289
Effective length of database: 285
Effective search space: 82365
Effective search space used: 82365
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.0 bits)
S2: 22 (13.1 bits)