>YOR117W RPT5 SGDID:S000005643, Chr XV from 545030-546334, Verified
           ORF, "One of six ATPases of the 19S regulatory particle
           of the 26S proteasome involved in the degradation of
           ubiquitinated substrates; recruited to the GAL1-10
           promoter region upon induction of transcription"
          Length = 434

 Score =  546 bits (1407), Expect = e-160
 Identities = 282/438 (64%), Positives = 346/438 (78%), Gaps = 11/438 (2%)

Query: 1   MNVENIFGNEEVNVEEIEKLSNSEIKTRVSLIDTEIKILKNEHARLKNEYKNLQEKIKDN 60
           ++ + + G++E++ +EI  LS  E++TR  L+D EI+I ++E  RL +E   + EKIKDN
Sbjct: 7   LDAQTLPGDDELD-QEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDN 65

Query: 61  VEKIHLNKMLPYLVANVVXXXXXXXXXXXXXXXXXXXXYDNNLKLSHEGFRDIDDEKRGK 120
            EKI  N+ LPYLVANVV                     +N+   +  G  ++D+   GK
Sbjct: 66  KEKIKNNRQLPYLVANVVEVMDMNEIEDK----------ENSESTTQGGNVNLDNTAVGK 115

Query: 121 CMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEK 180
             V+KTS+RQT+FLP+ GL+D  +LKP DLVGVNKDSYLI+D LP E+D+RVKAMEV EK
Sbjct: 116 AAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEK 175

Query: 181 PSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARAC 240
           P+E YSD+GGLDKQIE+LVEAIVLPM   +KF+ +GI+ PKG LM+GPPGTGKTLLARAC
Sbjct: 176 PTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARAC 235

Query: 241 ASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSEL 300
           A+QTNATFLKLA PQLVQM+IG+GAK+VRDAF LAKEKAP IIFIDELDAIGTKRFDSE 
Sbjct: 236 AAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK 295

Query: 301 SGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEE 360
           SGDREVQRTMLELLNQLDGFS+DD VKV+AATNR D LDPALLRSGRLDRKIE P P+E+
Sbjct: 296 SGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSED 355

Query: 361 SRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDF 420
           SRA+ILQIHSRKM    D+N++ELARSTD+FNGAQLKAV VEAGMIALR G + + HEDF
Sbjct: 356 SRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDF 415

Query: 421 VEGITSVLSKKKSTLNYF 438
           VEGI+ V ++K  +++++
Sbjct: 416 VEGISEVQARKSKSVSFY 433

Lambda     K      H
   0.316    0.135    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 599
Number of extensions: 17
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 434
Length adjustment: 32
Effective length of query: 407
Effective length of database: 402
Effective search space:   163614
Effective search space used:   163614
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)