>YDR212W TCP1 SGDID:S000002620, Chr IV from 887228-888907, Verified
           ORF, "Alpha subunit of chaperonin-containing T-complex,
           which mediates protein folding in the cytosol; involved
           in maintenance of actin cytoskeleton; homolog to
           Drosophila melanogaster and mouse tailless complex
           polypeptide"
          Length = 559

 Score =  583 bits (1504), Expect = e-171
 Identities = 301/547 (55%), Positives = 408/547 (74%), Gaps = 6/547 (1%)

Query: 2   SLSIYGNRESGQDVRTANVTAVQAISNILKSSLGPQGLDKMLVDNIGDVTITNDGATILK 61
           +L + G + SG D+R  NV A  A++N++KSSLGP GLDKMLVD+IGD T+TNDGATIL 
Sbjct: 12  TLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILS 71

Query: 62  QLEVQHPAAKILVNLSELQDQEVGDGTTSVVLLASELLRRGNELIKMDIHPTTVICGYKL 121
            L+VQHPA KILV L++ QD+E+GDGTTSVV++ASELL+R NEL+K  IHPTT+I G+++
Sbjct: 72  LLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRV 131

Query: 122 AMKESVKYIKEKLSERVSNLGKDVIINIAKTTLSSKFISYESDYFAKMVANAIQSVKIIN 181
           A++E++++I E LS  V  LGK+ +INIAKT++SSK I  +SD+F+ MV +A+ +VK  N
Sbjct: 132 ALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQN 191

Query: 182 ESGKTKYPVSSVNVIKVHGMSSLDSKLIEGYAIMSGRASQAMPTVIK--NAKIAFLDFPL 239
             G+ KYPV +VNV+K HG S+ +S L+ GYA+    ASQAMP  I   N KIA LD  L
Sbjct: 192 SKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNL 251

Query: 240 KQYRLHLGVQVNINDPKELEKIRQKEKDITKERVNKILESGANVILTTQGIDDMPLKYFV 299
           ++ R+ +GVQ+NI+DP++LE+IR++E  I  ERV KI+++GA V+LTT+GIDD+ LK FV
Sbjct: 252 QKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFV 311

Query: 300 EAGAIAVRRVNKDDLRRIAKLTNGQIRLTLSSIDGTEKFEASSLGYCDEVYEDKVGDWDL 359
           EA  + VRR  K+DLRRIA+ T   +  ++S+++G E FE+S LG CDEV + K  D + 
Sbjct: 312 EAKIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDEC 371

Query: 360 MFFKGCRTSKSNTILLRGANDFVLDEMQRSIHDALCSVSRALESNYVVVGGGCVEVALSV 419
           +  KG     S++I+LRGAND+ LDEM+RS+HD+L  V R LES  VV GGGCVE AL++
Sbjct: 372 ILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNI 431

Query: 420 YLEDFAKTLGSREQLAIAEFAESLLVIPKILALNASYDSIDLVCKLRAYHTKSQVMNIED 479
           YL++FA T+GSREQLAIAEFA +LL+IPK LA+NA+ DS +LV KLR+YH  SQ+   ED
Sbjct: 432 YLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPED 491

Query: 480 SK--DYKWYGLDLVNGKVANNLKNGVLEAMISKIKSIRFATEATITILRIDDLIKLVPEE 537
            K   Y+ YGLDL+ GK+ + +  GVLE  ISK+KS++ A EA + ILRID +I + PE 
Sbjct: 492 VKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEP 551

Query: 538 RKMEEEP 544
            K  E+P
Sbjct: 552 PK--EDP 556

Lambda     K      H
   0.316    0.133    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 723
Number of extensions: 27
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 559
Length adjustment: 36
Effective length of query: 508
Effective length of database: 523
Effective search space:   265684
Effective search space used:   265684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)