>YJR045C SSC1 SGDID:S000003806, Chr X from 521517-519553, reverse
           complement, Verified ORF, "Mitochondrial matrix ATPase
           that is a subunit of the presequence
           translocase-associated protein import motor (PAM);
           involved in protein translocation into the matrix and
           protein folding; member of the heat shock protein 70
           (HSP70) family"
          Length = 654

 Score =  709 bits (1830), Expect = 0.0
 Identities = 355/616 (57%), Positives = 461/616 (74%), Gaps = 6/616 (0%)

Query: 32  SKINRNRASGDIIGIDLGTTNSCVAIMEGKQGKVIENSEGFRTTPSVVAFTNDNQRLVGI 91
           +++   +  G +IGIDLGTTNS VAIMEGK  K+IEN+EG RTTPSVVAFT + +RLVGI
Sbjct: 21  TRLQSTKVQGSVIGIDLGTTNSAVAIMEGKVPKIIENAEGSRTTPSVVAFTKEGERLVGI 80

Query: 92  VAKRQAITNPENTVYATKRFIGRKYDEDATKKEQKNLPYKIVRASNGDAWIEAQGKKYSP 151
            AKRQA+ NPENT++ATKR IGR++++   +++ K +PYKIV+ SNGDAW+EA+G+ YSP
Sbjct: 81  PAKRQAVVNPENTLFATKRLIGRRFEDAEVQRDIKQVPYKIVKHSNGDAWVEARGQTYSP 140

Query: 152 SQIGACVLEKMKETAENYLGRKVHQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEP 211
           +QIG  VL KMKETAE YLG+ V  AV+TVPAYFNDSQRQATKDAG+I GL+VLR++NEP
Sbjct: 141 AQIGGFVLNKMKETAEAYLGKPVKNAVVTVPAYFNDSQRQATKDAGQIVGLNVLRVVNEP 200

Query: 212 TAAALAFGLEKSDGKVIAVYDLGGGTFDISILEILSGVFEVKATNGNTSLGGEDFDQRIL 271
           TAAALA+GLEKSD KV+AV+DLGGGTFDISIL+I +GVFEVK+TNG+T LGGEDFD  +L
Sbjct: 201 TAAALAYGLEKSDSKVVAVFDLGGGTFDISILDIDNGVFEVKSTNGDTHLGGEDFDIYLL 260

Query: 272 EYFISEFKKKENIDLKNDKLALQRLREAAETAKIELSSKTQTEINLPFITANQTGPKHLQ 331
              +S FK +  IDL+ND++A+QR+REAAE AKIELSS   TEINLPFITA+ +GPKH+ 
Sbjct: 261 REIVSRFKTETGIDLENDRMAIQRIREAAEKAKIELSSTVSTEINLPFITADASGPKHIN 320

Query: 332 IKLTRAKLEELCHDLLKGTIEPCEKCIKDADVKKEEINEIILVGGMTRMPKVTDTVKQIF 391
           +K +RA+ E L   L+K T++P +K +KDA +   +I+E++LVGGM+RMPKV +TVK +F
Sbjct: 321 MKFSRAQFETLTAPLVKRTVDPVKKALKDAGLSTSDISEVLLVGGMSRMPKVVETVKSLF 380

Query: 392 QNNPSKGVNPDEAVALGAAIQGGVLKGEIKDXXXXXXXXXXXGIETLGGVFTKLINRNTT 451
             +PSK VNPDEAVA+GAA+QG VL GE+ D           GIETLGGVFT+LI RNTT
Sbjct: 381 GKDPSKAVNPDEAVAIGAAVQGAVLSGEVTDVLLLDVTPLSLGIETLGGVFTRLIPRNTT 440

Query: 452 IPTKKSQIFSTAADNQTQVSIKVFQGEREMASDNKLLGSFDLVGIPPAPRGVPQIEVTFD 511
           IPTKKSQIFSTAA  QT V I+VFQGERE+  DNKL+G+F L GIPPAP+GVPQIEVTFD
Sbjct: 441 IPTKKSQIFSTAAAGQTSVEIRVFQGERELVRDNKLIGNFTLAGIPPAPKGVPQIEVTFD 500

Query: 512 VDXXXXXXXXXXDKMTNKKQQITIQSSGGLSKEEIEKMVQEAELNREKDQLKKNLTDSKN 571
           +D          DK TNK   IT+  S GLS+ EIE+MV +AE  + +D+ +K   ++ N
Sbjct: 501 IDADGIINVSARDKATNKDSSITVAGSSGLSENEIEQMVNDAEKFKSQDEARKQAIETAN 560

Query: 572 EAETLIYSSEKQLEXXXXXXXXXXXXELRQKITVLREKLT------SEDLDSIKDATKQL 625
           +A+ L   +E  L+            ++R +IT L+E +         + + +K  T++L
Sbjct: 561 KADQLANDTENSLKEFEGKVDKAEAQKVRDQITSLKELVARVQGGEEVNAEELKTKTEEL 620

Query: 626 QEKSWAISQEMYKNNA 641
           Q  S  + +++YKN++
Sbjct: 621 QTSSMKLFEQLYKNDS 636

Lambda     K      H
   0.312    0.130    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1089
Number of extensions: 49
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 654
Length adjustment: 38
Effective length of query: 625
Effective length of database: 616
Effective search space:   385000
Effective search space used:   385000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)