Query= PF11_0353 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(1805 letters)
>YNL227C JJJ1 SGDID:S000005171, Chr XIV from 222432-220660, reverse
complement, Uncharacterized ORF, "Protein that contains
a 70 amino acid J-domain, may function as a co-chaperone
to recruit Hsp70-like activity to specific sites;
mutation causes defects in fluid-phase endocytosis"
Length = 590
Score = 36.6 bits (83), Expect = 9e-06
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 52 KYENKTKKVEINEFIGEDENLKVKLYGKEDIQEEDIIKRCLFCDKDNKILEQLSYRILYD 111
K EN + ++ + GE EN K D + E +I C C+K K +QL I
Sbjct: 307 KEENWDELEKVYDNFGEFEN------SKNDKEGEVLIYECFICNKTFKSEKQLKNHINTK 360
Query: 112 VMKKCIDHENVLMKIEELGFTADNIKD-EKDENINICSKYKVDTFLDYIYKNLNVIK 167
+ KK ++ M+ E + DN+ D EK ++ + K K D L + L I+
Sbjct: 361 LHKKNMEEIRKEMEEENITLGLDNLSDLEKFDSADESVKEKEDIDLQALQAELAEIE 417
Score = 26.2 bits (56), Expect = 0.013
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 1239 NKYIKKFYFYLNSLTFYLKECKKLDVSYTKPLFYEILPIIMKSLFFINKKVTSKLKKNEL 1298
NK +K+F ++ L +KE K+ +K+ + +KNEL
Sbjct: 243 NKTVKRFVVFIKKLDKRMKEGAKIAEE--------------------QRKLKEQQRKNEL 282
Query: 1299 FKHLVDIGRSNIKEFLFHVTPGLVLEEANCKKI-STYILYLLIKNYKIEYEYQVQLFSIC 1357
+ G N E FH+ ++E N ++ Y + +N K + E +V ++ C
Sbjct: 283 -NNRRKFGNDNNDEEKFHLQSWQTVKEENWDELEKVYDNFGEFENSKNDKEGEVLIYE-C 340
Query: 1358 LILSNA--SEKNLLKVFIKYLLTCIYTFNEDIVLNNMKE 1394
I + SEK L ++ T ++ N + + M+E
Sbjct: 341 FICNKTFKSEKQLK----NHINTKLHKKNMEEIRKEMEE 375
Score = 24.6 bits (52), Expect = 0.037
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 999 NKKKSNRKQMKSIHVSEKLYCQNMKTLR 1026
NK + KQ+K+ H++ KL+ +NM+ +R
Sbjct: 344 NKTFKSEKQLKN-HINTKLHKKNMEEIR 370
Score = 20.4 bits (41), Expect = 0.69
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 66 IGEDENLKVKLYGK-----EDIQEEDI-----IKRC-LFCDKDNKILEQL 104
+ +DE L K GK +D+ E+DI +K C F +K +K+L L
Sbjct: 131 LAKDEILSGKRLGKFSEYQDDVFEQDINSIGYLKACDNFINKTDKLLYPL 180
Score = 20.4 bits (41), Expect = 0.69
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 452 DNMNELTQNIFINVYNILNCTHLIHKHMILLYFSFNFLKMSSYEYSYFIVVN 503
DN T + ++ + KH + +FN LK S++ Y N
Sbjct: 167 DNFINKTDKLLYPLFGYSPTDYEYLKHFYKTWSAFNTLKSFSWKDEYMYSKN 218
Score = 19.2 bits (38), Expect = 1.5
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 543 KEKGNELNEEFYIFVQKFNNKHKNIYSKLIRRIWSLYMLIISDDYVKNSSNKEDMKINVE 602
+E +EL + + F + N+K+ LI + S+ +KN N + K N+E
Sbjct: 308 EENWDELEKVYDNFGEFENSKNDKEGEVLIYECFICNKTFKSEKQLKNHINTKLHKKNME 367
Query: 603 Q 603
+
Sbjct: 368 E 368
Score = 18.9 bits (37), Expect = 2.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 1673 DSDQEENVQMNTDGK 1687
D +ENV +NT K
Sbjct: 444 DVSSDENVHVNTKNK 458
Score = 18.1 bits (35), Expect = 3.4
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 1295 KNELFKHLVDIGRSNIK 1311
+N+LF H+ G + +K
Sbjct: 561 RNKLFNHVKIAGHAAVK 577
Score = 17.3 bits (33), Expect = 5.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 61 EINEFIGEDENLKVKLYGKEDIQEEDI 87
++ E EDE+ L + DI+ ED+
Sbjct: 419 KLAESSSEDESEDDNLNIEMDIEVEDV 445
Score = 16.9 bits (32), Expect = 7.7
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 1600 KKNKNTKAIKYNP 1612
KK KA++Y+P
Sbjct: 21 KKAYRKKALQYHP 33
Score = 16.9 bits (32), Expect = 7.7
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 263 SYDENYKIFNY 273
S+D K+FN+
Sbjct: 557 SFDSRNKLFNH 567
Score = 16.9 bits (32), Expect = 7.7
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 1347 YEYQVQLFSICLILSNASEKNLLK 1370
++ + +LF+ I +A+ KN++K
Sbjct: 558 FDSRNKLFNHVKIAGHAAVKNVVK 581
Lambda K H
0.322 0.139 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2767
Number of extensions: 161
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 12
Length of query: 1805
Length of database: 590
Length adjustment: 45
Effective length of query: 1760
Effective length of database: 545
Effective search space: 959200
Effective search space used: 959200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.7 bits)
S2: 32 (16.9 bits)