Query= PF11_0377 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) casein kinase 1 (323 letters)
>YPL204W HRR25 SGDID:S000006125, Chr XVI from 164275-165759,
           Verified ORF, "Protein kinase involved in regulating
           diverse events including vesicular trafficking, gene
           expression, DNA repair, and chromosome segregation;
           binds the CTD of RNA pol II; homolog of mammalian casein
           kinase 1delta (CK1delta)"
          Length = 494

 Score =  373 bits (958), Expect = e-108
 Identities = 169/291 (58%), Positives = 225/291 (77%)

Query: 1   MEIRVANKYALGKKLGSGSFGDIYVAKDIVTMEEFAVKLESTRSKHPQLLYESKLYKILG 60
           M++RV  K+ +G+K+GSGSFGDIY   ++++ EE A+KLES RS+HPQL YES++Y+ L 
Sbjct: 1   MDLRVGRKFRIGRKIGSGSFGDIYHGTNLISGEEVAIKLESIRSRHPQLDYESRVYRYLS 60

Query: 61  GGIGVPKVYWYGIEGDFTIMVLDLLGPSLEDLFTLCNRKFSLKTVLMTADQMLNRIEYVH 120
           GG+G+P + W+G EG++  MV+DLLGPSLEDLF  C+R+FS KTV+M A QM  RI+Y+H
Sbjct: 61  GGVGIPFIRWFGREGEYNAMVIDLLGPSLEDLFNYCHRRFSFKTVIMLALQMFCRIQYIH 120

Query: 121 SKNFIHRDIKPDNFLIGRGKKVTLIHIIDFGLAKKYRDSRSHTHIPYKEGKNLTGTARYA 180
            ++FIHRDIKPDNFL+G G++ + +H+IDFGL+KKYRD  +H HIPY+E K+LTGTARYA
Sbjct: 121 GRSFIHRDIKPDNFLMGVGRRGSTVHVIDFGLSKKYRDFNTHRHIPYRENKSLTGTARYA 180

Query: 181 SINTHLGIEQSRRDDIEALGYVLMYFLRGSLPWQGLKAISXXXXXXXXXXXXXSTSVEVL 240
           S+NTHLGIEQSRRDD+E+LGYVL+YF +GSLPWQGLKA +             + SVE L
Sbjct: 181 SVNTHLGIEQSRRDDLESLGYVLIYFCKGSLPWQGLKATTKKQKYDRIMEKKLNVSVETL 240

Query: 241 CRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWT 291
           C     EF  Y+ YC++L+F+++PDY +L RL KDL I+  +  D LFDWT
Sbjct: 241 CSGLPLEFQEYMAYCKNLKFDEKPDYLFLARLFKDLSIKLEYHNDHLFDWT 291
Lambda     K      H
   0.323    0.140    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 425
Number of extensions: 10
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 494
Length adjustment: 31
Effective length of query: 292
Effective length of database: 463
Effective search space:   135196
Effective search space used:   135196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)