Query= PF11_0418 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(2275 letters)
>FBgn0030082 type=protein; loc=X:8975392..8976114; ID=FBpp0071221;
name=HP1b-PA; parent=FBgn0030082,FBtr0071284;
dbxref=FlyBase:FBpp0071221,
FlyBase_Annotation_IDs:CG7041-PA,GB_protein:AAF46438.1,
GB_protein:AAF46438;
MD5=3af2075f2419d9ef812ab878ade34a78; release=r5.1;
species=Dmel; length=240;
Length = 240
Score = 41.6 bits (96), Expect = 1e-07
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 74 EFYIKWKNYDSDENTWEPFENL 95
E+Y+KWK Y ENTWEP ENL
Sbjct: 20 EYYLKWKGYPRSENTWEPVENL 41
Score = 19.2 bits (38), Expect = 0.72
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 1366 NVLENVLSALKENRTYNSKDLNISKENENANGHIRSNSYTDT 1407
+++ N +LK N+ K L+ S E+ +S DT
Sbjct: 45 DLIANFEESLKNNKKETKKRLSTSSTPESIRSKRKSFLEDDT 86
Score = 16.9 bits (32), Expect = 3.6
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 18/52 (34%)
Query: 2026 EYNIKILEDK------TEYIINNEYLKNS------------PGDVSNFEDSM 2059
E++++ +EDK TEY + + S P ++NFE+S+
Sbjct: 3 EFSVERVEDKRTVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESL 54
Score = 16.9 bits (32), Expect = 3.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 319 DGNNNSVHL 327
+GN NSV+L
Sbjct: 160 NGNTNSVNL 168
Score = 15.8 bits (29), Expect = 8.0
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 494 EDNVQEHHKLL 504
ED+ +E KL+
Sbjct: 83 EDDTEEQKKLI 93
Score = 15.8 bits (29), Expect = 8.0
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 1575 NDKHNMNNDEQNNSGGVNKM 1594
N N N+ +SGG+ +
Sbjct: 158 NGNGNTNSVNLGSSGGLGSV 177
Score = 15.8 bits (29), Expect = 8.0
Identities = 5/5 (100%), Positives = 5/5 (100%)
Query: 1135 NGNTN 1139
NGNTN
Sbjct: 160 NGNTN 164
Lambda K H
0.312 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1010
Number of extensions: 49
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 7
Length of query: 2275
Length of database: 240
Length adjustment: 39
Effective length of query: 2236
Effective length of database: 201
Effective search space: 449436
Effective search space used: 449436
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.0 bits)
S2: 29 (15.8 bits)