Query= PF11_0488 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(1429 letters)
>YPL153C RAD53 SGDID:S000006074, Chr XVI from 264191-261726, reverse
complement, Verified ORF, "Protein kinase, required for
cell-cycle arrest in response to DNA damage; activated by
trans autophosphorylation when interacting with
hyperphosphorylated Rad9p"
Length = 821
Score = 77.4 bits (189), Expect = 5e-18
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 40/283 (14%)
Query: 1158 LIGRGGFAEVWEVFDSINLEMYAAKIHKIEPSMSNEIKNKIIQRAENEINIHIHCHRHIF 1217
++G+G FA V + + + +A KI + N + E+ + + H
Sbjct: 203 VVGQGAFATVKKAIERTTGKTFAVKIISKRKVIGN------MDGVTRELEV-LQKLNHPR 255
Query: 1218 IVKLEFFFVFGSATNLLVGMELCDIDLDKYIKYHGPINELLALCWIKQILLGLLYMKNLP 1277
IV+L+ F+ + + +V + DL ++ HG + E +QIL + Y+ ++
Sbjct: 256 IVRLKGFYE-DTESYYMVMEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMG 314
Query: 1278 TGKVHHCDLKPANLLIKDG---IIKISDFGLAKLILPDTHQYYNGG------GTLYYQPP 1328
+ H DLKP N+LI+ ++KI+DFGLAK+ NG GTL Y P
Sbjct: 315 ---ISHRDLKPDNILIEQDDPVLVKITDFGLAKV-------QGNGSFMKTFCGTLAYVAP 364
Query: 1329 ECLKNKKNLLITDK----------IDIWSLGCILYEMLFCERPFQFNYLEKCSKELLVNK 1378
E ++ K + D+ +D+WS+GC++Y +L PF + ++ K++
Sbjct: 365 EVIRGKDTSVSPDEYEERNEYSSLVDMWSMGCLVYVILTGHLPFSGSTQDQLYKQIGRGS 424
Query: 1379 MKNGLTYPKINQKISNATLSYIQYLLNFDYELRPSIEEALSYP 1421
G P + +IS +I LL D R + +AL++P
Sbjct: 425 YHEG---PLKDFRISEEARDFIDSLLQVDPNNRSTAAKALNHP 464
Lambda K H
0.319 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2071
Number of extensions: 94
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 1429
Length of database: 821
Length adjustment: 46
Effective length of query: 1383
Effective length of database: 775
Effective search space: 1071825
Effective search space used: 1071825
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.6 bits)
S2: 32 (16.9 bits)