Query= PF11_0488 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein (1429 letters)
>YPL153C RAD53 SGDID:S000006074, Chr XVI from 264191-261726, reverse
            complement, Verified ORF, "Protein kinase, required for
            cell-cycle arrest in response to DNA damage; activated by
            trans autophosphorylation when interacting with
            hyperphosphorylated Rad9p"
          Length = 821

 Score = 77.4 bits (189), Expect = 5e-18
 Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 40/283 (14%)

Query: 1158 LIGRGGFAEVWEVFDSINLEMYAAKIHKIEPSMSNEIKNKIIQRAENEINIHIHCHRHIF 1217
            ++G+G FA V +  +    + +A KI      + N      +     E+ + +    H  
Sbjct: 203  VVGQGAFATVKKAIERTTGKTFAVKIISKRKVIGN------MDGVTRELEV-LQKLNHPR 255

Query: 1218 IVKLEFFFVFGSATNLLVGMELCDIDLDKYIKYHGPINELLALCWIKQILLGLLYMKNLP 1277
            IV+L+ F+   + +  +V   +   DL  ++  HG + E       +QIL  + Y+ ++ 
Sbjct: 256  IVRLKGFYE-DTESYYMVMEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMG 314

Query: 1278 TGKVHHCDLKPANLLIKDG---IIKISDFGLAKLILPDTHQYYNGG------GTLYYQPP 1328
               + H DLKP N+LI+     ++KI+DFGLAK+         NG       GTL Y  P
Sbjct: 315  ---ISHRDLKPDNILIEQDDPVLVKITDFGLAKV-------QGNGSFMKTFCGTLAYVAP 364

Query: 1329 ECLKNKKNLLITDK----------IDIWSLGCILYEMLFCERPFQFNYLEKCSKELLVNK 1378
            E ++ K   +  D+          +D+WS+GC++Y +L    PF  +  ++  K++    
Sbjct: 365  EVIRGKDTSVSPDEYEERNEYSSLVDMWSMGCLVYVILTGHLPFSGSTQDQLYKQIGRGS 424

Query: 1379 MKNGLTYPKINQKISNATLSYIQYLLNFDYELRPSIEEALSYP 1421
               G   P  + +IS     +I  LL  D   R +  +AL++P
Sbjct: 425  YHEG---PLKDFRISEEARDFIDSLLQVDPNNRSTAAKALNHP 464
Lambda     K      H
   0.319    0.137    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2071
Number of extensions: 94
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 1429
Length of database: 821
Length adjustment: 46
Effective length of query: 1383
Effective length of database: 775
Effective search space:  1071825
Effective search space used:  1071825
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.6 bits)
S2: 32 (16.9 bits)