Query= PF13_0014 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal protein S7 homologue, putative (194 letters)
>YOR096W RPS7A SGDID:S000005622, Chr XV from
           505795-505938,506340-506768, Verified ORF, "Protein
           component of the small (40S) ribosomal subunit, nearly
           identical to Rps7Bp; interacts with Kti11p; deletion
           causes hypersensitivity to zymocin; has similarity to
           rat S7 and Xenopus S8 ribosomal proteins"
          Length = 190

 Score =  121 bits (304), Expect = 7e-33
 Identities = 73/191 (38%), Positives = 120/191 (62%), Gaps = 7/191 (3%)

Query: 1   MDAVQKRVLKSNPSDLEKEIAQCLLDIELXXXXDIKTDAKEIKLLSCDLIEVEKLKKKTI 60
           M A Q ++L   P++LE ++AQ  +++E     ++K + + ++  S   I+V    KK +
Sbjct: 1   MSAPQAKILSQAPTELELQVAQAFVELE-NSSPELKAELRPLQFKSIREIDVAG-GKKAL 58

Query: 61  LIYIPYKIYTTYVRKIQRKLINELEKKTK-KYVVLVAKRTIL-KGKQKNKSFKIIPRSRT 118
            I++P      +  K+Q KL  ELEKK + ++V+ +A+R IL K  + ++  +  PRSRT
Sbjct: 59  AIFVPVPSLAGF-HKVQTKLTRELEKKFQDRHVIFLAERRILPKPSRTSRQVQKRPRSRT 117

Query: 119 LTSVYDSILEDIVSPSEIIGKRISMKADGKRVFKIMLDSKERQRDNIEEKLISFAAVYKK 178
           LT+V+D ILED+V P+EI+GKR+     G ++ K++LDSK+ Q+  I+ KL SF AVY K
Sbjct: 118 LTAVHDKILEDLVFPTEIVGKRVRYLVGGNKIQKVLLDSKDVQQ--IDYKLESFQAVYNK 175

Query: 179 ITRRDAVFSLP 189
           +T +  VF +P
Sbjct: 176 LTGKQIVFEIP 186
Lambda     K      H
   0.317    0.135    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 120
Number of extensions: 11
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 190
Length adjustment: 20
Effective length of query: 174
Effective length of database: 170
Effective search space:    29580
Effective search space used:    29580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.1 bits)
S2: 18 (11.5 bits)