>YOL005C RPB11 SGDID:S000005365, Chr XV from 316176-315814, reverse
           complement, Verified ORF, "RNA polymerase II subunit
           B12.5; part of central core; similar to Rpc19p and
           bacterial alpha subunit"
          Length = 120

 Score = 66.6 bits (161), Expect = 1e-16
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 2/104 (1%)

Query: 8   NKPETVDLLVLAPGEKKVTCTISDKG-DCNIFVIKLEDHTIGNLIKIQLCQDPKVLFAAY 66
           N P+  +L +L  GE K+      K  +  +   + EDHT+GNLI+ +L  D KVLFAAY
Sbjct: 2   NAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAAY 61

Query: 67  RQPHPLQNAIEITIK-PKGYAGVKLLSDNVNNILSQVATLKENF 109
           +  HP     ++ I+  +GY     L +  N+I++++  LK NF
Sbjct: 62  KVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNF 105

Lambda     K      H
   0.315    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 120
Length adjustment: 14
Effective length of query: 112
Effective length of database: 106
Effective search space:    11872
Effective search space used:    11872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.8 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.7 bits)
S2: 15 (10.4 bits)