Query= PF13_0045 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S27, putative
(82 letters)
>FBgn0039300 type=protein;
loc=3R:complement(21072075..21072103,
21072170..21072389,21073155..21073160); ID=FBpp0084242;
name=RpS27-PA; parent=FBgn0039300,FBtr0084868;
dbxref=FlyBase:FBpp0084242,
FlyBase_Annotation_IDs:CG10423-PA,
GB_protein:AAF56428.1,GB_protein:AAF56428;
MD5=12891c10f84e6af4a613b302d70f03eb; release=r5.1;
species=Dmel; length=84;
Length = 84
Score = 128 bits (321), Expect = 1e-35
Identities = 56/77 (72%), Positives = 65/77 (84%)
Query: 4 DLLNPDPVEESKKHKLKRLIPTPNSYFMDVKCPGCLQITTLFSHAQNVVLCGSCNIMLCQ 63
DLL+P P EE +KHKLKRL+ PNSYFMDVKCPGC +ITT+FSHAQ VV+C C +LCQ
Sbjct: 6 DLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATILCQ 65
Query: 64 PTGGKCKLTEGCSFRKK 80
PTGG+ KLTEGCSFR+K
Sbjct: 66 PTGGRAKLTEGCSFRRK 82
Lambda K H
0.322 0.138 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 82
Length of database: 84
Length adjustment: 8
Effective length of query: 74
Effective length of database: 76
Effective search space: 5624
Effective search space used: 5624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 12 ( 5.6 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 12 ( 8.4 bits)
S2: 12 ( 9.2 bits)