Query= PF13_0045 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S27, putative
(82 letters)
>YHR021C RPS27B SGDID:S000001063, Chr VIII from
148662-148660,148109-147864, reverse complement,
Verified ORF, "Protein component of the small (40S)
ribosomal subunit; nearly identical to Rps27Ap and has
similarity to rat S27 ribosomal protein"
Length = 82
Score = 113 bits (283), Expect = 3e-31
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 4 DLLNPDPVEESKKHKLKRLIPTPNSYFMDVKCPGCLQITTLFSHAQNVVLCGSCNIMLCQ 63
DLL+P E++KHKLK L+ P SYF+DVKCPGCL ITT+FSHAQ V C SC+ +LC
Sbjct: 6 DLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTVLCT 65
Query: 64 PTGGKCKLTEGCSFRKK 80
PTGGK KL+EG SFR+K
Sbjct: 66 PTGGKAKLSEGTSFRRK 82
Lambda K H
0.322 0.138 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 82
Length of database: 82
Length adjustment: 8
Effective length of query: 74
Effective length of database: 74
Effective search space: 5476
Effective search space used: 5476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 12 ( 5.6 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 12 ( 8.4 bits)
S2: 12 ( 9.2 bits)