Query= PF13_0049 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L24, putative
(162 letters)
>YGR148C RPL24B SGDID:S000003380, Chr VII from 787784-787317,
reverse complement, Verified ORF, "Ribosomal protein L30
of the large (60S) ribosomal subunit, nearly identical
to Rpl24Ap and has similarity to rat L24 ribosomal
protein; not essential for translation but may be
required for normal translation rate"
Length = 155
Score = 59.3 bits (142), Expect = 3e-14
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 8 VKTEACSFSEYRIYPGRGQKYIARDGKVYFYXXXXXXXXXXXXXXXXXXRWTQTWRRNNK 67
+K E SFS +IYPGRG ++ D K++ + WT +R+++K
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 68 KTKIETTQRRRYKKTIKVQKAVCGLTVEDIRNRKAYVQSIEAKNK 112
K E ++R +KT+K Q+ + G +++ I+ R++ + N+
Sbjct: 61 KGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANR 105
Lambda K H
0.319 0.130 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 155
Length adjustment: 17
Effective length of query: 145
Effective length of database: 138
Effective search space: 20010
Effective search space used: 20010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.8 bits)
S2: 17 (11.2 bits)