Query= PF13_0051 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) snornp protein gar1 homologue, putative (209 letters)
>YHR089C GAR1 SGDID:S000001131, Chr VIII from 283300-282683, reverse
           complement, Verified ORF, "Protein component of the
           H/ACA snoRNP pseudouridylase complex, involved in the
           modification and cleavage of the 18S pre-rRNA"
          Length = 205

 Score = 81.6 bits (200), Expect = 9e-21
 Identities = 34/66 (51%), Positives = 49/66 (74%)

Query: 49  VPYFNGRIFLENKEEIGKVDEILGPINEFYFSVKLKEGIRAKSFSSDTHFFIDKSQTLPL 108
           +PYFN  I+LENK ++GKVDEILGP+NE +F++K  +G++A SF     F+I   + LP+
Sbjct: 60  IPYFNAPIYLENKTQVGKVDEILGPLNEVFFTIKCGDGVQATSFKEGDKFYIAADKLLPI 119

Query: 109 SRFLPQ 114
            RFLP+
Sbjct: 120 ERFLPK 125
Lambda     K      H
   0.324    0.143    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 104
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 205
Length adjustment: 21
Effective length of query: 188
Effective length of database: 184
Effective search space:    34592
Effective search space used:    34592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)