>YKL145W RPT1 SGDID:S000001628, Chr XI from 174218-175621, Verified
           ORF, "One of six ATPases of the 19S regulatory particle
           of the 26S proteasome involved in the degradation of
           ubiquitinated substrates; required for optimal CDC20
           transcription; interacts with Rpn12p and the E3
           ubiquitin-protein ligase Ubr1p"
          Length = 467

 Score =  593 bits (1529), Expect = e-174
 Identities = 289/440 (65%), Positives = 357/440 (81%), Gaps = 30/440 (6%)

Query: 11  PLDDEDINILKSYGSGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGLCLPNQWDLQLD 70
           PL + DI +LKSYG+ PY+  +K+ E D+  +   I +  GV+ESDTGL   + WD+  D
Sbjct: 28  PLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGD 87

Query: 71  KQMLNEEQPLQVARCTKII--NADTDQT----------------------------KYII 100
           +Q L EE PLQVARCTKII  N ++D+T                            KY+I
Sbjct: 88  RQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVI 147

Query: 101 NVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDIT 160
           N+KQIAKFVVGLG++V+P+DIEEGMRVGVDR+KY I++ LPP+IDPSVTMMTVEEKPD+T
Sbjct: 148 NLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVT 207

Query: 161 YNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRT 220
           Y+D+GGCK+Q+EKLREVVE+PLL PERF TLGIDPPKG+LLYGPPGTGKTL ARA+ANRT
Sbjct: 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRT 267

Query: 221 DACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDH 280
           DA FI VIGSELVQKYVGEGARMVRELF+MA++KKACI+F DE+DA+GG+R D+ A GD+
Sbjct: 268 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 327

Query: 281 EVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTH 340
           EVQRTMLE++ QLDGFD RGNIKV+ ATNRP+TLD AL+RPGRIDR++EFSLPDLEGR +
Sbjct: 328 EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRAN 387

Query: 341 IFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAI 400
           IF+IH+ +M++ R +R+EL++RLCPNSTG+++RSVCTEAGMFAIRARRK  TEKD L A+
Sbjct: 388 IFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAV 447

Query: 401 NKVIHGCKQFSATGKYMVYN 420
           +KVI G K+FS+T +YM YN
Sbjct: 448 DKVISGYKKFSSTSRYMQYN 467

Lambda     K      H
   0.319    0.137    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 679
Number of extensions: 18
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 467
Length adjustment: 32
Effective length of query: 388
Effective length of database: 435
Effective search space:   168780
Effective search space used:   168780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)