Query= PF13_0087 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein, conserved (316 letters)
>YJL125C GCD14 SGDID:S000003661, Chr X from 186599-185448, reverse
           complement, Verified ORF, "Subunit of tRNA
           (1-methyladenosine) methyltransferase, with Gcd10p,
           required for the modification of the adenine at position
           58 in tRNAs, especially tRNAi-Met; first identified as a
           negative regulator of GCN4 expression"
          Length = 383

 Score =  144 bits (363), Expect = 3e-39
 Identities = 86/254 (33%), Positives = 142/254 (55%), Gaps = 24/254 (9%)

Query: 1   MIKEGNCVVIYSDEENIDLLKLTNDGIINNKKGRFLHKDIIGKEYGSKI-YDTLNKN--- 56
           +IKEG+  +I+   +NI  +++ ++ + N + G F HKDIIGK YGS+I   T   N   
Sbjct: 12  LIKEGDLTLIWVSRDNIKPVRMHSEEVFNTRYGSFPHKDIIGKPYGSQIAIRTKGSNKFA 71

Query: 57  YIYVLKRSPELIVNCLKKKTQTLYEHDISFICLVCNALPNKKILEAGTGTGCLTYALANS 116
           +++VL+ +PEL    L  +TQ +Y  D S+I    N  P+ +++EAGTG+G  ++A A S
Sbjct: 72  FVHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPHSRVIEAGTGSGSFSHAFARS 131

Query: 117 VLPNGVIHTFEYNEERYKQVQQEFDDFENIRKNITFHHQDILNYNF-----DDFPLEYFD 171
           V   G + +FE++  RY+Q  +EF +   I  N+T  H+D+    F     D    E+ +
Sbjct: 132 V---GHLFSFEFHHIRYEQALEEFKEHGLIDDNVTITHRDVCQGGFLIKKGDTTSYEFGN 188

Query: 172 S----------IFLDMPNPWLCVDNMKKVLK--ERGVFVIFLPCIEQVYKILEALEKNSF 219
           +          +FLD+P PW  + ++  V+   E+     F PCIEQV K L+ LEK  +
Sbjct: 189 NETAASLNANVVFLDLPAPWDAIPHLDSVISVDEKVGLCCFSPCIEQVDKTLDVLEKYGW 248

Query: 220 SDIETYELINKSWK 233
           +D+E  E+  + ++
Sbjct: 249 TDVEMVEIQGRQYE 262

 Score = 23.9 bits (50), Expect = 0.007
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 284 QKENKTHTGYLTIAKRCLNDEHEQPEI 310
           + E K+HT YLT A + +N   +  ++
Sbjct: 348 EAEIKSHTSYLTFAFKVVNRSRDDEKV 374
Lambda     K      H
   0.321    0.140    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 323
Number of extensions: 20
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 316
Length of database: 383
Length adjustment: 29
Effective length of query: 287
Effective length of database: 354
Effective search space:   101598
Effective search space used:   101598
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.5 bits)
S2: 23 (13.5 bits)