Query= PF13_0129 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal protein L6 homologue, putative (190 letters)
>YGL147C RPL9A SGDID:S000003115, Chr VII from 228334-227759, reverse
           complement, Verified ORF, "Protein component of the
           large (60S) ribosomal subunit, nearly identical to
           Rpl9Bp and has similarity to E. coli L6 and rat L9
           ribosomal proteins"
          Length = 191

 Score =  160 bits (405), Expect = 1e-44
 Identities = 94/192 (48%), Positives = 125/192 (65%), Gaps = 5/192 (2%)

Query: 1   MKTIVSTQKVLIPEGVKVAINARKVTVSGKYGTLRRSFRHLPIDIRLNKLK-KYIKVVMW 59
           MK I + Q++ +PEGV V+I +R V V G  GTL ++ +H  ID+   K+  + IKV + 
Sbjct: 1   MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKH--IDVTFTKVNNQLIKVAVH 58

Query: 60  FGVPDSLACIRTVCTHLKNMFTGVTKKFLYKMRLVHAHFPINSNIVDNNTR--IEIRNYL 117
            G    +A +RTV + + NM TGVTK + YKMR V+AHFPIN NIV+ +    IE+RN+L
Sbjct: 59  NGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFL 118

Query: 118 GEKSVRFVKALPGVVIEKSPNVKDEIYVSGADIENVSLTAALIHQSVLCRNKDIRKFLDG 177
           G+K +R V    GV IE S NVKDEI +SG  +E+VS  AA + Q    RNKDIRKFLDG
Sbjct: 119 GDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDG 178

Query: 178 IYVSEVTTVEKD 189
           IYVS    + +D
Sbjct: 179 IYVSHKGFITED 190
Lambda     K      H
   0.322    0.138    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 132
Number of extensions: 8
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 191
Length adjustment: 20
Effective length of query: 170
Effective length of database: 171
Effective search space:    29070
Effective search space used:    29070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.2 bits)
S2: 18 (11.5 bits)