Query= PF13_0132 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L23a, putative
(190 letters)
>FBgn0026372 type=protein;
loc=3L:complement(1667346..1667735,1667809..1668221,
1668596..1668626); ID=FBpp0072687; name=RpL23A-PA;
parent=FBgn0026372,FBtr0072805;
dbxref=FlyBase:FBpp0072687,
FlyBase_Annotation_IDs:CG7977-PA,GB_protein:AAF47545.1,
GB_protein:AAF47545;
MD5=72c109ba1880501fee25f5f1a556a4f0; release=r5.1;
species=Dmel; length=277;
Length = 277
Score = 108 bits (269), Expect = 1e-28
Identities = 58/108 (53%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Query: 84 TLIYARNPKCPRIVKSCHSKT-LDKYGLIKYPLTSEKAMKKIEEINTLVFMCDKRANKKN 142
TL R+PK PR KS ++ +D Y +IKYPLT+E AMKKIE+ NTLVF+ RANK +
Sbjct: 172 TLKLPRSPKYPR--KSVPTRNRMDAYNIIKYPLTTEAAMKKIEDNNTLVFLTHLRANKNH 229
Query: 143 IKKSVKNLFGIECDKVNVLNTLNGDKKAYVRLSGEHDALEVANKIGIL 190
++ +V+ L+ I+ KVNVL +G KKAYVRL+ ++DAL++ANKIGI+
Sbjct: 230 VRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGII 277
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 5
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 277
Length adjustment: 23
Effective length of query: 167
Effective length of database: 254
Effective search space: 42418
Effective search space used: 42418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.0 bits)
S2: 20 (12.3 bits)