Query= PF13_0132 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L23a, putative
(190 letters)
>YOL127W RPL25 SGDID:S000005487, Chr XV from
80348-80360,80775-81190, Verified ORF, "Primary
rRNA-binding ribosomal protein component of the large
(60S) ribosomal subunit, has similarity to E. coli L23
and rat L23a ribosomal proteins; binds to 26S rRNA via a
conserved C-terminal motif"
Length = 142
Score = 96.7 bits (239), Expect = 2e-25
Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 84 TLIYARNPKCPRIVKSCHSKTLDKYGLIKYPLTSEKAMKKIEEINTLVFMCDKRANKKNI 143
TL AR PK H LD Y +I+ P+TSE AMKK+E+ N LVF +ANK I
Sbjct: 37 TLKLARAPKYASKAVP-HYNRLDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQI 95
Query: 144 KKSVKNLFGIECDKVNVLNTLNGDKKAYVRLSGEHDALEVANKIGIL 190
KK+VK L+ ++ KVN L NG KKAYVRL+ ++DAL++AN+IG +
Sbjct: 96 KKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI 142
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 142
Length adjustment: 18
Effective length of query: 172
Effective length of database: 124
Effective search space: 21328
Effective search space used: 21328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 17 (10.7 bits)
S2: 17 (11.2 bits)