Query= PF13_0136 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(376 letters)
>YDR361C BCP1 SGDID:S000002769, Chr IV from 1196254-1195403, reverse
complement, Uncharacterized ORF, "Essential protein
involved in nuclear export of Mss4p, which is a lipid
kinase that generates phosphatidylinositol
4,5-biphosphate and plays a role in actin cytoskeleton
organization and vesicular transport"
Length = 283
Score = 31.2 bits (69), Expect = 4e-05
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 240 NNDKHVGLVITNRIINCPIKLIPLLYENVYEDI 272
+ +K+ LV++ R+IN P +++P LY+ ED+
Sbjct: 147 SGNKNCALVLSERLINMPPEVVPPLYKITLEDV 179
Score = 18.9 bits (37), Expect = 0.19
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 10/40 (25%)
Query: 101 RKSVSTNNQSIEN----------NNEHQFNDDDDIVVDFE 130
RK+V N S E+ N E Q +++ + +DF+
Sbjct: 15 RKNVEEENGSDESEIDISSTDSENEEEQNGEEEIVNIDFD 54
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 216
Number of extensions: 12
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 2
Length of query: 376
Length of database: 283
Length adjustment: 28
Effective length of query: 348
Effective length of database: 255
Effective search space: 88740
Effective search space used: 88740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.4 bits)
S2: 23 (13.5 bits)