Query= PF13_0143 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding)
phosphoribosylpyrophosphate synthetase
(437 letters)
>YER099C PRS2 SGDID:S000000901, Chr V from 359057-358101, reverse
complement, Verified ORF,
"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase,
involved in nucleotide, histidine, and tryptophan
biosynthesis; one of a five related enzymes, which are
active as heteromultimeric complexes"
Length = 318
Score = 221 bits (563), Expect = 3e-62
Identities = 128/317 (40%), Positives = 190/317 (59%), Gaps = 14/317 (4%)
Query: 120 LFSGTSNPLLSKNVADHLGTSLGRVNLKRFADGEVSMQFLESIRGKDVYIIQPTCPP--V 177
L +G S+P L++ ++ LG L +V + ++++ E S+ ESIR +DVYIIQ +
Sbjct: 8 LLAGNSHPGLAELISQRLGVPLSKVGVYQYSNKETSVTIGESIRDEDVYIIQTGYGEHEI 67
Query: 178 NENLIELLLMISTCRRASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAMGVDR 237
N+ L+ELL++I C+ AS ++ITAVIP + YARQD+K SR PI+A +A ++E G D
Sbjct: 68 NDFLMELLILIHACKTASVRRITAVIPNFPYARQDKKDKSRAPITAKLIANLLETAGCDH 127
Query: 238 VVAIDLHSGQIQGFFGPRVPVDNLEAQLIGLDYF-TKKDLYKPVIVSPDAGGVYRARKFQ 296
V+ +DLH+ QIQGFF +PVDNL + L+Y TK D ++VSPDAGG R
Sbjct: 128 VITMDLHASQIQGFF--HIPVDNLYGEPSVLNYIRTKTDFNNAILVSPDAGGAKRVASLA 185
Query: 297 DGLNHRGIGDCGIAMLIKQRTKPNEIEKMDLVGNXXXXXXXXXXXXXXTSGTLCEAAKQL 356
D L D A++ K+R K NE+ +M LVG+ T GTL +A L
Sbjct: 186 DKL------DMNFALIHKERQKANEVSRMLLVGDVAGKSCLLIDDMADTCGTLVKACDTL 239
Query: 357 KKHGARRVFAFATHGLFSGPAIDRIEKSPLEEVVVTDTVKSNKNIDSCKKITKLSVSVLV 416
HGA+ V A THG+FSG A +++ S L +V T+TV + ++D + ++ +S +
Sbjct: 240 MDHGAKEVIAIVTHGIFSGSAREKLINSRLSRIVCTNTVPVDLDLDI---VDQVDISPTI 296
Query: 417 ADAIRRIHQKESLNDLF 433
A+AIRR+H ES++ LF
Sbjct: 297 AEAIRRLHNGESVSYLF 313
Score = 20.4 bits (41), Expect = 0.085
Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 132 NVADHLGTSLGRVNLKRFADGEVS-MQFLESIRGKDVYIIQPTCPPVNENLIELLLMIST 190
++AD L + ++ +R EVS M + + GK +I L+ T
Sbjct: 183 SLADKLDMNFALIHKERQKANEVSRMLLVGDVAGKSCLLIDDMADTCGT----LVKACDT 238
Query: 191 CRRASAKKITAVIPY--YGYARQDRKLSSR---------VPISA-ADVARMIEAMGVDRV 238
AK++ A++ + + + +++ ++SR VP+ D+ ++
Sbjct: 239 LMDHGAKEVIAIVTHGIFSGSAREKLINSRLSRIVCTNTVPVDLDLDIVDQVDISPTIAE 298
Query: 239 VAIDLHSGQIQGFFGPRVPV 258
LH+G+ + PV
Sbjct: 299 AIRRLHNGESVSYLFTHAPV 318
Lambda K H
0.320 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 292
Number of extensions: 13
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 437
Length of database: 318
Length adjustment: 30
Effective length of query: 407
Effective length of database: 288
Effective search space: 117216
Effective search space used: 117216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)