Query= PF13_0156 Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome subunit beta type 7 precursor, putative (270 letters)
>YOR157C PUP1 SGDID:S000005683, Chr XV from 631752-630967, reverse
           complement, Verified ORF, "Endopeptidase with
           trypsin-like activity that cleaves after basic residues;
           beta-type subunit of 20S proteasome synthesized as a
           proprotein before being proteolytically processed for
           assembly into 20S particle; human homolog is subunit Z"
          Length = 261

 Score =  226 bits (576), Expect = 4e-64
 Identities = 121/246 (49%), Positives = 160/246 (65%), Gaps = 4/246 (1%)

Query: 15  GYNFDNLKRNEILKEKGVKFPQFRKTGTTICGLVCQNAVILGADTRATEGPIVADKNCSK 74
           G +FDN +RN  L E     P+   TGTTI G+   N V++ ADTR+T+GPIVADKNC+K
Sbjct: 3   GLSFDNYQRNNFLAENSHTQPKATSTGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAK 62

Query: 75  LHYISKNIWCAGAGVAGDLEHTTLWLQHNVELHRLNTNTQPRVSMCVSRLTQELFKYQGY 134
           LH IS  IWCAGAG A D E  T  +  N+ELH L T+ +PRV   +  L Q LFKYQG+
Sbjct: 63  LHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGH 122

Query: 135 KVCAIVLGGVDVNGPQLYGIHPHGSSCLLPFTALGSGSLNAMAVLEAKYRDNMTIEEGKN 194
               +++ GVD  G  L+ IH HGS+ +  + +LGSGSL AMAVLE+ ++ ++T EE   
Sbjct: 123 IGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIK 182

Query: 195 LVCEAICAGIFNDLGSGGNVDICV--ITKDSYQHIRPYKEPNMRLYHLPHPTIYPKGTTP 252
           L  +AI AGI+NDLGSG NVD+CV  I KD+ +++R Y  PN+R         +P+GTT 
Sbjct: 183 LASDAIQAGIWNDLGSGSNVDVCVMEIGKDA-EYLRNYLTPNVR-EEKQKSYKFPRGTTA 240

Query: 253 ILSEKI 258
           +L E I
Sbjct: 241 VLKESI 246

 Score = 13.9 bits (24), Expect = 3.9
 Identities = 9/37 (24%), Positives = 14/37 (37%)

Query: 110 NTNTQPRVSMCVSRLTQELFKYQGYKVCAIVLGGVDV 146
           N   + + S    R T  + K     +C I    VD+
Sbjct: 223 NVREEKQKSYKFPRGTTAVLKESIVNICDIQEEQVDI 259
Lambda     K      H
   0.319    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 261
Number of extensions: 11
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 270
Length of database: 261
Length adjustment: 25
Effective length of query: 245
Effective length of database: 236
Effective search space:    57820
Effective search space used:    57820
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)