>YDR255C RMD5 SGDID:S000002663, Chr IV from 967817-966552, reverse
           complement, Verified ORF, "Cytosolic protein required
           for sporulation; also required for the ubiquitination of
           the gluconeogenetic enzyme fructose-1,6-bisphosphatase,
           which is degraded rapidly after the switch from
           gluconeogenesis to glycolysis"
          Length = 421

 Score = 38.5 bits (88), Expect = 7e-07
 Identities = 70/362 (19%), Positives = 136/362 (37%), Gaps = 54/362 (14%)

Query: 385 IEKKLKDLSDDVSIEKLNTMLEKLQ--------ALKNKVNESNFLLNKYIKRLVSRLKYI 436
           +  KL D        K   ++EKL         ++K ++   +   N++ K  +++LK  
Sbjct: 58  VYNKLSDKEKQKFKRKRELIIEKLSKSQRQWDHSVKKQIKYVSQQSNRFNKSTLNKLK-- 115

Query: 437 YFEGDIQVQNLKYDFRFQNYEKRINWLINEYLCRYGYFDTVSIFCKRYNLEDYSDKDVY- 495
               +  + ++  +   +   + +N  I  ++ RY   D + +  K    +    KDVY 
Sbjct: 116 ----EFDIDSVYVNKLPKETMENVNEAIGYHILRYS-IDNMPLGNKNEAFQYL--KDVYG 168

Query: 496 ------KEYI---YIINELMKYNTQPALDYCQKYKSQLKKIDSNIESELHLQYVIHLIFD 546
                  E+I    I+++L K +T+  L +C      L    + + S     Y +  +  
Sbjct: 169 ITNKESTEFIEMGQIVHDLKKGDTESCLKWCSNEMESLSSNHTALSSLKFDLYTLSAMQI 228

Query: 547 NKYLEAIE-YIKKTISQPHGCLASDLKFLITHIALHNXXXXXXXXFND------NRWKRV 599
            K+   +E Y + T + P  C     K L+ ++              D         K  
Sbjct: 229 VKHGNPVELYYQITQNAPLDCFRHREKELMQNVVPLLTKSLIGQPIEDIDSKVNKELKEC 288

Query: 600 INLFKKVYSDISGLTTNPLLELLIKAGI----------SVIKTDHCGSKTSTKCPTCIKE 649
            +LF K Y     +  +  L L++ +G+          ++ +  H    T  + P  +K 
Sbjct: 289 TSLFIKEYCAAKHIFFDSPLFLIVLSGLISFQFFIKYKTIRELAHVDWTTKDELPFDVK- 347

Query: 650 LKNIINKLPN-IQKTKSFLVCPYTNEVMDEHNPPFTTPTGYVFSEKAISLFLK-AEETFE 707
                  LP+ +       +CP   E     NPP++    ++ S+KA+    K    TF+
Sbjct: 348 -------LPDFLTHFHPIFICPVLKEETTTENPPYSLACHHIISKKALDRLSKNGTITFK 400

Query: 708 CP 709
           CP
Sbjct: 401 CP 402

 Score = 29.3 bits (64), Expect = 4e-04
 Identities = 12/36 (33%), Positives = 22/36 (61%)

Query: 500 YIINELMKYNTQPALDYCQKYKSQLKKIDSNIESEL 535
           Y  + L + N Q  LD+  ++KSQLKK+ +++   +
Sbjct: 16  YTDSNLEETNLQKCLDHTHEFKSQLKKLKAHLNKHI 51

 Score = 23.1 bits (48), Expect = 0.030
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 355 FIQVPLNCILNTFRNIQKEIEKNFMIITLFIEKKLKDLSDDVSIEKLNTMLEKLQAL 411
           + Q+  N  L+ FR+ +KE+ +N  ++ L  +  +    +D+   K+N  L++  +L
Sbjct: 238 YYQITQNAPLDCFRHREKELMQN--VVPLLTKSLIGQPIEDID-SKVNKELKECTSL 291

 Score = 16.2 bits (30), Expect = 3.6
 Identities = 8/32 (25%), Positives = 11/32 (34%)

Query: 683 FTTPTGYVFSEKAISLFLKAEETFECPITNEK 714
           +TT     F  K           F CP+  E+
Sbjct: 336 WTTKDELPFDVKLPDFLTHFHPIFICPVLKEE 367

 Score = 16.2 bits (30), Expect = 3.6
 Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 4/36 (11%)

Query: 614 TTNPLLELLIKAGISVIKTDHCGSKTST---KCPTC 646
           T NP   L     IS    D   SK  T   KCP C
Sbjct: 370 TENPPYSLACHHIISKKALDRL-SKNGTITFKCPYC 404

Lambda     K      H
   0.319    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 696
Number of extensions: 41
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 725
Length of database: 421
Length adjustment: 36
Effective length of query: 689
Effective length of database: 385
Effective search space:   265265
Effective search space used:   265265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.3 bits)
S2: 27 (15.0 bits)