Query= PF13_0171 Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L23, putative
(139 letters)
>FBgn0010078 type=protein;
loc=2R:join(18742040..18742052,18742170..18742381,
18742968..18743165); ID=FBpp0071808; name=RpL23-PA;
parent=FBgn0010078,FBtr0071897;
dbxref=GB_protein:AAF46914.1,FlyBase:FBpp0071808,
FlyBase_Annotation_IDs:CG3661-PA,GB_protein:AAF46914;
MD5=91472336627593eb0a972b29a50a5e93; release=r5.1;
species=Dmel; length=140;
Length = 140
Score = 197 bits (502), Expect = 4e-56
Identities = 94/137 (68%), Positives = 114/137 (83%)
Query: 2 KRGRAGTLKNKMRITLSLPVGALINCCDNSGGKNLYIIAVQGFGSCLNRLPAASLGDMVL 61
KRGR GT K RI+L LPVGA++NC DN+G KNLY+IAV G LNRLPAA +GDM +
Sbjct: 3 KRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFV 62
Query: 62 ATVKKGKPDLRKKVLNAIICRQSKAWRRHEGYYIYFEDNAGVIVNPKGEMKGSAITGPVA 121
ATVKKGKP+LRKKV+ A++ RQ K +RR +G +IYFEDNAGVIVN KGEMKGSAITGPVA
Sbjct: 63 ATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVA 122
Query: 122 RECAELWPKLSSAASAI 138
+ECA+LWP+++S AS+I
Sbjct: 123 KECADLWPRIASNASSI 139
Lambda K H
0.320 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 124
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 140
Length adjustment: 15
Effective length of query: 124
Effective length of database: 125
Effective search space: 15500
Effective search space used: 15500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.3 bits)
S2: 16 (10.8 bits)